RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 CACTIN-AS1Q8N1I8 211 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 CHCHD4Q8N4Q1 142 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 CCDC26Q8TAB7 109 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 SPATA20Q8TB22 786 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 DDI1Q8WTU0 396 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 CCDC47Q96A33 483 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 MED15Q96RN5 788 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 NUSAP1Q9BXS6 441 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 MIR1-1HGQ9H1L0 117 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 C6orf106Q9H6K1 298 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 PRDM16Q9HAZ2 1276 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 ABCB8Q9NUT2 735 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 ELOVL2Q9NXB9 296 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 WSB2Q9NYS7 404 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 USP36Q9P275 1121 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 SERGEFQ9UGK8 458 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 SLC27A6Q9Y2P4 619 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 PCDHB4Q9Y5E5 795 aa9.61□□□□□ -0.87
NPLOC4-210ENST00000572824 ITPR1Q14643 2758 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 ACACAQ13085 2346 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 MEI4A8MW99 385 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 KCNK3O14649 394 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 NCAM1P13591 858 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 CEACAM1P13688 526 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 NID1P14543 1247 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 CD6P30203 668 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 ACSL1P33121 698 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 IRAK1P51617 712 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 CLDN6P56747 220 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 RPS24P62847 133 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 DUOXA1Q1HG43 343 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 PLEKHG6Q3KR16 790 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 DCAF12L1Q5VU92 463 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 DENND1BQ6P3S1 775 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 CHST9Q7L1S5 443 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 CIR1Q86X95 450 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 TMPRSS6Q8IU80 811 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 PPM1KQ8N3J5 372 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 CCDC150Q8NCX0 1101 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 SMARCE1Q969G3 411 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 ZNF419Q96HQ0 510 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 LMLNQ96KR4 655 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 MIS12Q9H081 205 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 LRRC4Q9HBW1 653 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 ARMCX3Q9UH62 379 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 EIF2B4Q9UI10 523 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 INTS6Q9UL03 887 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 SOX13Q9UN79 622 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 BTBD3Q9Y2F9 522 aa9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 SMG1Q96Q15 3661 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-210ENST00000572824 ARID1BQ8NFD5 2236 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 TAF4O00268 1085 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 TBL1XO60907 577 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 IGLV3-27P01718 113 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 PROS1P07225 676 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 PNMA6AP0CW24 399 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 ZNF132P52740 706 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 METAP1P53582 386 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 COG7P83436 770 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 FKBP3Q00688 224 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 GFPT1Q06210 699 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 ENPEPQ07075 957 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 LMAN2Q12907 356 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 TAF5Q15542 800 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 CCDC40Q4G0X9 1142 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 COBLL1Q53SF7 1204 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 FSCBQ5H9T9 825 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 SYPL2Q5VXT5 272 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 SERPINA13PQ6UXR4 307 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 TAC4Q86UU9 113 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 SIX6OS1Q8N1H7 587 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 CFAP52Q8N1V2 620 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 CPXM2Q8N436 756 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 ZNF276Q8N554 614 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 IL22RA1Q8N6P7 574 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 DQX1Q8TE96 717 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 SLC35F5Q8WV83 523 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 NELFBQ8WX92 580 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 SNX19Q92543 992 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 SIPA1Q96FS4 1042 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 FCRL2Q96LA5 508 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 IPO9Q96P70 1041 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 TSG101Q99816 390 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 MUC3BQ9H195 1237 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 FAM8A1Q9UBU6 413 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 GGA2Q9UJY4 613 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 NAALADL1Q9UQQ1 740 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 NBEAQ8NFP9 2946 aa9.59□□□□□ -0.87
NPLOC4-210ENST00000572824 A0A1B0GVT2 93 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 PLK4O00444 970 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 OPHN1O60890 802 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 NDUFS2O75306 463 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 MOCS2O96007 188 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 LTFP02788 710 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 VDRP11473 427 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 PABPC1P11940 636 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 VAV1P15498 845 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 CHKAP35790 457 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms