RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ATP6V0D2Q8N8Y2 350 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 LSM14AQ8ND56 463 aaKnown RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 EHBP1Q8NDI1 1231 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 OR8D1Q8WZ84 308 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 SLC39A7Q92504 469 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 BAP1Q92560 729 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 FGF11Q92914 225 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 SMARCE1Q969G3 411 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 DHTKD1Q96HY7 919 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 MED15Q96RN5 788 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 PPP1R9BQ96SB3 815 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 PRMT1Q99873 361 aaKnown RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 SLC4A5Q9BY07 1137 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 THAP9Q9H5L6 903 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 GDPD2Q9HCC8 539 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 RAI2Q9Y5P3 530 aa10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 COL5A1P20908 1838 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC1-205ENST00000572656 A0A1B0GVM2 712 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 TCAF2A6NFQ2 919 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 E5RJQ4 531 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 PRAMEF26H0Y7S4 382 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 MED7O43513 233 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 ATP9BO43861 1147 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 PRB1P04280 392 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 SLC2A3P11169 496 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 GLDCP23378 1020 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 MAT2AP31153 395 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 ACTN2P35609 894 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 CNTN1Q12860 1018 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 ZNF211Q13398 564 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 PROX2Q3B8N5 592 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 SETMARQ53H47 684 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 RABGAP1LQ5R372 815 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 CXorf57Q6NSI4 855 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 CIR1Q86X95 450 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 DCBLD1Q8N8Z6 715 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 ERCC4Q92889 916 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 KREMEN1Q96MU8 473 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 HOOK1Q9UJC3 728 aaKnown RBP10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 SARDHQ9UL12 918 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 PPM1HQ9ULR3 514 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 CLCA2Q9UQC9 943 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 ACACAQ13085 2346 aa10.16□□□□□ -0.78
TRAPPC1-205ENST00000572656 C1QTNF3-AMACRE9PGA6 284 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 TRIM38O00635 465 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 MCF2LO15068 1137 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 ALOX15BO15296 676 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 SIGLEC6O43699 453 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 BRINP1O60477 761 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 RNGTTO60942 597 aaKnown RBP10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 SDC3O75056 442 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 C1QL1O75973 258 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 KRT5P13647 590 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 CD44P16070 742 aaKnown RBP10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 ZNF18P17022 549 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 CCR1P32246 355 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 PPP1R2P41236 205 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 NUMBP49757 651 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 PITX1P78337 314 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 CDK17Q00537 523 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 E2F1Q01094 437 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 INSM1Q01101 510 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 MTA1Q13330 715 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 TAF5Q15542 800 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 DLG2Q15700 870 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 ACCSLQ4AC99 568 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 AGBL4Q5VU57 503 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 FBXL22Q6P050 247 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 FOXR2Q6PJQ5 311 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 SLC25A45Q8N413 288 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 ZNF606Q8WXB4 792 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 ALG14Q96F25 216 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 KLHDC7BQ96G42 594 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 FCRL3Q96P31 734 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 FEM1AQ9BSK4 669 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 FAM204AQ9H8W3 233 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 PREBQ9HCU5 417 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 SLC25A13Q9UJS0 675 aa10.15□□□□□ -0.78
TRAPPC1-205ENST00000572656 NUMA1Q14980 2115 aa10.15□□□□□ -0.79
TRAPPC1-205ENST00000572656 URB1O60287 2271 aaKnown RBP10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 TEX51A0A1B0GUA7 166 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 GOLGA6L4A6NEF3 574 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 LETM1O95202 739 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 GNA14O95837 355 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 MT-CO3P00414 261 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 GLI1P08151 1106 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 TAS2R38P59533 333 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 KCNH2Q12809 1159 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 ZNF177Q13360 481 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 PDCLQ13371 301 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 AUHQ13825 339 aaKnown RBP10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 TBC1D25Q3MII6 688 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 POM121L1PQ3SYA9 428 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 ISM2Q6H9L7 571 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 TTI2Q6NXR4 508 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 NEK5Q6P3R8 708 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 Q6ZVU0 165 aa10.14□□□□□ -0.79
TRAPPC1-205ENST00000572656 GPR155Q7Z3F1 870 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms