RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 HSFX1Q9UBD0 423 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 CHORDC1Q9UHD1 332 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 MBD1Q9UIS9 605 aaPredicted RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 KLK13Q9UKR3 277 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 MMP17Q9ULZ9 603 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 DAAM1Q9Y4D1 1078 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 PCDHGA5Q9Y5G8 931 aa6.62□□□□□ -1.35
PRPF8-204ENST00000572445 SRPRBQ9Y5M8 271 aaKnown RBP6.62□□□□□ -1.35
PRPF8-204ENST00000572445 FRYQ5TBA9 3013 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 ATP8B3O60423 1300 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 PCDH15Q96QU1 1955 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 ZNF840PA6NDX5 716 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 MEI4A8MW99 385 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 COCHO43405 550 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 SLC26A4O43511 780 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 EXOC3O60645 756 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 ADAM23O75077 832 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 ALDH1A2O94788 518 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 TBX18O95935 607 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 OAS1P00973 400 aaKnown RBP6.61□□□□□ -1.35
PRPF8-204ENST00000572445 ENGP17813 658 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 PTPN1P18031 435 aaKnown RBP6.61□□□□□ -1.35
PRPF8-204ENST00000572445 CD58P19256 250 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 LPOP22079 712 aaPredicted RBP6.61□□□□□ -1.35
PRPF8-204ENST00000572445 ALAS2P22557 587 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 YWHAQP27348 245 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 SERPINB3P29508 390 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 HOXA6P31267 233 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 ABCD1P33897 745 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 HOXD13P35453 343 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 PIK3CAP42336 1068 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 NUMBP49757 651 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 PGFP49763 221 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 LIMK1P53667 647 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 SLC5A3P53794 718 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 MAP3K7CLP57077 242 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 CRY1Q16526 586 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 DUOXA2Q1HG44 320 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 DPY19L1Q2PZI1 675 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 CFAP221Q4G0U5 840 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 EXOSC6Q5RKV6 272 aaKnown RBP6.61□□□□□ -1.35
PRPF8-204ENST00000572445 BTBD8Q5XKL5 378 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 SLCO4C1Q6ZQN7 724 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 TOGARAM2Q6ZUX3 1019 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 STXBP4Q6ZWJ1 553 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 GPRIN1Q7Z2K8 1008 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 FAM124AQ86V42 546 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 KIF18BQ86Y91 864 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 MIB1Q86YT6 1006 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 WDR49Q8IV35 697 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 DMRTC2Q8IXT2 367 aaPredicted RBP6.61□□□□□ -1.35
PRPF8-204ENST00000572445 CAMKK1Q8N5S9 505 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 CLRN3Q8NCR9 226 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 MYCBPAPQ8TBZ2 947 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 CNOT6LQ96LI5 555 aaKnown RBP6.61□□□□□ -1.35
PRPF8-204ENST00000572445 LRGUKQ96M69 825 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 HSPA12BQ96MM6 686 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 CAMK1GQ96NX5 476 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 PNKPQ96T60 521 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 STRA6Q9BX79 667 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 BBS2Q9BXC9 721 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 NUSAP1Q9BXS6 441 aaKnown RBP6.61□□□□□ -1.35
PRPF8-204ENST00000572445 SLC13A1Q9BZW2 595 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 ELOVL4Q9GZR5 314 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 SDCBP2Q9H190 292 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 OLFML3Q9NRN5 406 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 GDAP2Q9NXN4 497 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 USP25Q9UHP3 1055 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 TMEFF2Q9UIK5 374 aaPredicted RBP6.61□□□□□ -1.35
PRPF8-204ENST00000572445 MTMR6Q9Y217 621 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 CFAP47Q6ZTR5 3102 aa6.61□□□□□ -1.35
PRPF8-204ENST00000572445 NYNRINQ9P2P1 1898 aaKnown RBP6.6□□□□□ -1.35
PRPF8-204ENST00000572445 ACACAQ13085 2346 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 LRRIQ3A6PVS8 624 aaPredicted RBP6.6□□□□□ -1.35
PRPF8-204ENST00000572445 AQP7O14520 342 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 SPTLC2O15270 562 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 STX6O43752 255 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 FOXD2O60548 495 aaPredicted RBP6.6□□□□□ -1.35
PRPF8-204ENST00000572445 RNGTTO60942 597 aaKnown RBP6.6□□□□□ -1.35
PRPF8-204ENST00000572445 TULP3O75386 442 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 AKAP3O75969 853 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 BEST1O76090 585 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 SNUPNO95149 360 aaKnown RBP6.6□□□□□ -1.35
PRPF8-204ENST00000572445 CENPBP07199 599 aaPredicted RBP6.6□□□□□ -1.35
PRPF8-204ENST00000572445 HSP90AA1P07900 732 aaKnown RBP6.6□□□□□ -1.35
PRPF8-204ENST00000572445 TRIM49P0CI25 452 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 TRIM49CP0CI26 452 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 EPXP11678 715 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 DRD2P14416 443 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 GABRG2P18507 467 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 PDCP20941 246 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 SCP2P22307 547 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 MAGEA11P43364 429 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 MAP2K3P46734 347 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 LSSP48449 732 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 PDE6CP51160 858 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 FAM193AP78312 1265 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 RNF4P78317 190 aa6.6□□□□□ -1.35
PRPF8-204ENST00000572445 KLF1Q13351 362 aaPredicted RBP6.6□□□□□ -1.35
PRPF8-204ENST00000572445 ALCAMQ13740 583 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms