RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.01■□□□□ 0.15
TSR1-202ENST00000571806 GATAD2AQ86YP4 633 aa16.01■□□□□ 0.15
TSR1-202ENST00000571806 FRS2Q8WU20 508 aa16.01■□□□□ 0.15
TSR1-202ENST00000571806 OR8D1Q8WZ84 308 aa16.01■□□□□ 0.15
TSR1-202ENST00000571806 FAM204AQ9H8W3 233 aa16.01■□□□□ 0.15
TSR1-202ENST00000571806 DDIT4Q9NX09 232 aa16.01■□□□□ 0.15
TSR1-202ENST00000571806 CTNND2Q9UQB3 1225 aa16.01■□□□□ 0.15
TSR1-202ENST00000571806 TP53BP1Q12888 1972 aaPredicted RBP16■□□□□ 0.15
TSR1-202ENST00000571806 NYNRINQ9P2P1 1898 aaKnown RBP16■□□□□ 0.15
TSR1-202ENST00000571806 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16■□□□□ 0.15
TSR1-202ENST00000571806 C1QTNF3-AMACRE9PGA6 284 aa16■□□□□ 0.15
TSR1-202ENST00000571806 PLRG1O43660 514 aaKnown RBP16■□□□□ 0.15
TSR1-202ENST00000571806 ATP9BO43861 1147 aa16■□□□□ 0.15
TSR1-202ENST00000571806 RNGTTO60942 597 aaKnown RBP16■□□□□ 0.15
TSR1-202ENST00000571806 PDGFRAP16234 1089 aa16■□□□□ 0.15
TSR1-202ENST00000571806 EPHA8P29322 1005 aaPredicted RBP16■□□□□ 0.15
TSR1-202ENST00000571806 DRD3P35462 400 aa16■□□□□ 0.15
TSR1-202ENST00000571806 STK19P49842 368 aaPredicted RBP16■□□□□ 0.15
TSR1-202ENST00000571806 ZNF177Q13360 481 aaPredicted RBP16■□□□□ 0.15
TSR1-202ENST00000571806 STAT4Q14765 748 aa16■□□□□ 0.15
TSR1-202ENST00000571806 ACBD5Q5T8D3 534 aaPredicted RBP16■□□□□ 0.15
TSR1-202ENST00000571806 TRIM65Q6PJ69 517 aa16■□□□□ 0.15
TSR1-202ENST00000571806 TRIM69Q86WT6 500 aa16■□□□□ 0.15
TSR1-202ENST00000571806 CACTIN-AS1Q8N1I8 211 aa16■□□□□ 0.15
TSR1-202ENST00000571806 NXPE2Q96DL1 559 aa16■□□□□ 0.15
TSR1-202ENST00000571806 PPP1R13BQ96KQ4 1090 aa16■□□□□ 0.15
TSR1-202ENST00000571806 RPRD1AQ96P16 312 aaPredicted RBP16■□□□□ 0.15
TSR1-202ENST00000571806 SLC2A13Q96QE2 648 aa16■□□□□ 0.15
TSR1-202ENST00000571806 CYTH4Q9UIA0 394 aa16■□□□□ 0.15
TSR1-202ENST00000571806 PCDHGC3Q9UN70 934 aa16■□□□□ 0.15
TSR1-202ENST00000571806 FARP1Q9Y4F1 1045 aaPredicted RBP16■□□□□ 0.15
TSR1-202ENST00000571806 ATRXP46100 2492 aa16■□□□□ 0.15
TSR1-202ENST00000571806 ITPR1Q14643 2758 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 ZFYVE26Q68DK2 2539 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 FAM149AA5PLN7 773 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 MCF2LO15068 1137 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 CLDN11O75508 207 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 ZNF18P17022 549 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 SHBQ15464 509 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 ACCSLQ4AC99 568 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 SETMARQ53H47 684 aaPredicted RBP15.99■□□□□ 0.15
TSR1-202ENST00000571806 PRAMEF14Q5SWL7 426 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 CXorf57Q6NSI4 855 aaKnown RBP15.99■□□□□ 0.15
TSR1-202ENST00000571806 FBXL22Q6P050 247 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 NEK5Q6P3R8 708 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 C11orf57Q6ZUT1 292 aaPredicted RBP15.99■□□□□ 0.15
TSR1-202ENST00000571806 DEFB106AQ8N104 65 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 EID2Q8N6I1 236 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 TSC1Q92574 1164 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 CCDC114Q96M63 670 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 FEM1AQ9BSK4 669 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 RRN3Q9NYV6 651 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 ARHGAP20Q9P2F6 1191 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 APEX2Q9UBZ4 518 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 PPM1HQ9ULR3 514 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 KNL1Q8NG31 2342 aa15.99■□□□□ 0.15
TSR1-202ENST00000571806 GTPBP10A4D1E9 387 aaKnown RBP15.98■□□□□ 0.15
TSR1-202ENST00000571806 PRAMEF26H0Y7S4 382 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 USP8P40818 1118 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 ACADVLP49748 655 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 CDH4P55283 916 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 STX17P56962 302 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 KRT83P78385 493 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 PTK2Q05397 1052 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 AUHQ13825 339 aaKnown RBP15.98■□□□□ 0.15
TSR1-202ENST00000571806 C5orf22Q49AR2 442 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 SOWAHCQ53LP3 525 aaPredicted RBP15.98■□□□□ 0.15
TSR1-202ENST00000571806 SFMBT2Q5VUG0 894 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 GBP6Q6ZN66 633 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 ZDHHC17Q8IUH5 632 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 LRIG1Q96JA1 1093 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 CPXM1Q96SM3 734 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 NRSN2Q9GZP1 204 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 PREBQ9HCU5 417 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 VPS28Q9UK41 221 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 TBC1D30Q9Y2I9 924 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 PAXBP1Q9Y5B6 917 aa15.98■□□□□ 0.15
TSR1-202ENST00000571806 EIF4E1BA6NMX2 242 aaKnown RBP15.97■□□□□ 0.15
TSR1-202ENST00000571806 PLK4O00444 970 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 WNT9AO14904 365 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 PRKCSHP14314 528 aaPredicted RBP15.97■□□□□ 0.15
TSR1-202ENST00000571806 VAV1P15498 845 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 CKMT2P17540 419 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 NOS2P35228 1153 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 KRT9P35527 623 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 PPP2CBP62714 309 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 PPP2CAP67775 309 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 PITX1P78337 314 aaPredicted RBP15.97■□□□□ 0.15
TSR1-202ENST00000571806 TAF5Q15542 800 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 DLG2Q15700 870 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 EXOC3L4Q17RC7 722 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 MARCH9Q86YJ5 346 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 WDTC1Q8N5D0 677 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 SH2D3CQ8N5H7 860 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 PIP4K2CQ8TBX8 421 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 SHC3Q92529 594 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 ALG14Q96F25 216 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 C2orf49Q9BVC5 232 aaPredicted RBP15.97■□□□□ 0.15
TSR1-202ENST00000571806 RWDD2AQ9UIY3 292 aa15.97■□□□□ 0.15
TSR1-202ENST00000571806 VANGL2Q9ULK5 521 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms