RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 KRT15P19012 456 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 POU3F3P20264 500 aaPredicted RBP17.74■□□□□ 0.43
RPAIN-208ENST00000571043 CCT5P48643 541 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 USP46P62068 366 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 MTM1Q13496 603 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 DUSP6Q16828 381 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 FAM182AQ5T1J6 154 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 FOXR1Q6PIV2 292 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 SPATA31D4Q6ZUB0 917 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 RTL10Q7L3V2 364 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 PID1Q7Z2X4 250 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 NETO2Q8NC67 525 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 KREMEN2Q8NCW0 462 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 FBXO32Q969P5 355 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 FCRL2Q96LA5 508 aaPredicted RBP17.74■□□□□ 0.43
RPAIN-208ENST00000571043 TSGA13Q96PP4 275 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 RABEP2Q9H5N1 569 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 SSU72Q9NP77 194 aaKnown RBP17.74■□□□□ 0.43
RPAIN-208ENST00000571043 NKIRAS1Q9NYS0 192 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 KLHL8Q9P2G9 620 aaPredicted RBP17.74■□□□□ 0.43
RPAIN-208ENST00000571043 SMG5Q9UPR3 1016 aaKnown RBP17.74■□□□□ 0.43
RPAIN-208ENST00000571043 DOCK6Q96HP0 2047 aa17.74■□□□□ 0.43
RPAIN-208ENST00000571043 PRPF4O43172 522 aaKnown RBP eCLIP17.73■□□□□ 0.43
RPAIN-208ENST00000571043 PRKCHP24723 683 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 PSMB4P28070 264 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 MLLT6P55198 1093 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-208ENST00000571043 PPARDQ03181 441 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 EFTUD2Q15029 972 aaKnown RBP eCLIP17.73■□□□□ 0.43
RPAIN-208ENST00000571043 ZNF697Q5TEC3 545 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 ITPRIPL1Q6GPH6 555 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 RWDD4Q6NW29 188 aaKnown RBP17.73■□□□□ 0.43
RPAIN-208ENST00000571043 CYS1Q717R9 158 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 RBM23Q86U06 439 aaKnown RBP17.73■□□□□ 0.43
RPAIN-208ENST00000571043 CCNJLQ8IV13 435 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 DCAKDQ8WVC6 231 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 SLC44A1Q8WWI5 657 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 CFAP36Q96G28 342 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 ZNF317Q96PQ6 595 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-208ENST00000571043 CDCA3Q99618 268 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-208ENST00000571043 SEPT5Q99719 369 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-208ENST00000571043 SIK2Q9H0K1 926 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 TRABDQ9H4I3 376 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 TLR8Q9NR97 1041 aaKnown RBP17.73■□□□□ 0.43
RPAIN-208ENST00000571043 TTLL3Q9Y4R7 772 aa17.73■□□□□ 0.43
RPAIN-208ENST00000571043 FAM47DPA6NHR8 397 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 WASH4PA8MWX3 477 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 KCNK1O00180 336 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 EBAG9O00559 213 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 PRRG1O14668 218 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 SOAT2O75908 522 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 C1QAP02745 245 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 SRGAP2BP0DMP2 458 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 ATF6P18850 670 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 TBX4P57082 545 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 KCNC3Q14003 757 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 TEX44Q53QW1 395 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 ARTNQ5T4W7 220 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 ACBD5Q5T8D3 534 aaPredicted RBP17.72■□□□□ 0.43
RPAIN-208ENST00000571043 GPR153Q6NV75 609 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 CCDC149Q6ZUS6 474 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 SPATS2Q86XZ4 545 aaKnown RBP17.72■□□□□ 0.43
RPAIN-208ENST00000571043 PDCD7Q8N8D1 485 aaKnown RBP17.72■□□□□ 0.43
RPAIN-208ENST00000571043 PPP2R3CQ969Q6 453 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 SGSM3Q96HU1 749 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 SMC6Q96SB8 1091 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 PRMT1Q99873 361 aaKnown RBP17.72■□□□□ 0.43
RPAIN-208ENST00000571043 NSUN3Q9H649 340 aaKnown RBP17.72■□□□□ 0.43
RPAIN-208ENST00000571043 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.72■□□□□ 0.43
RPAIN-208ENST00000571043 HS3ST4Q9Y661 456 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 IQANK1A0A1B0GTG1 560 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 SDR42E2A6NKP2 422 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 ERI2A8K979 691 aaKnown RBP17.72■□□□□ 0.43
RPAIN-208ENST00000571043 FOXO6A8MYZ6 492 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 SUN1O94901 812 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 APOEP02649 317 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 ZDHHC11BP0C7U3 371 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 DRD4P21917 467 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 CCNCP24863 283 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 NRIP1P48552 1158 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 TAF10Q12962 218 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 MTA1Q13330 715 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 MPP2Q14168 576 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 TRIP4Q15650 581 aaPredicted RBP17.72■□□□□ 0.43
RPAIN-208ENST00000571043 KBTBD12Q3ZCT8 623 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 UNC5AQ6ZN44 842 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 LRRC49Q8IUZ0 686 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 STKLD1Q8NE28 680 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 GSDMBQ8TAX9 411 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 MZB1Q8WU39 189 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 NAT9Q9BTE0 207 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 GBA3Q9H227 469 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 PLAC1Q9HBJ0 212 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 DPP7Q9UHL4 492 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 RSPH14Q9UHP6 348 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 ZNF180Q9UJW8 692 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 GGA2Q9UJY4 613 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 NUDT5Q9UKK9 219 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 INSL5Q9Y5Q6 135 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 HCFC2Q9Y5Z7 792 aa17.72■□□□□ 0.43
RPAIN-208ENST00000571043 IKBKGQ9Y6K9 419 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms