RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ALLCQ8N6M5 410 aa15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 OR7D4Q8NG98 312 aa15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 WFDC5Q8TCV5 224 aa15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 HDAC11Q96DB2 347 aa15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 FERMT1Q9BQL6 677 aa15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 MUC3BQ9H195 1237 aa15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 MAGEH1Q9H213 219 aa15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 FEZ2Q9UHY8 353 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 TBC1D30Q9Y2I9 924 aa15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 NUMBLQ9Y6R0 609 aa15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 V9GYY5 206 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-219ENST00000570273 FAM187AA6NFU0 413 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 KCNN4O15554 427 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 ZNF189O75820 626 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 IFNB1P01574 187 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 RHOXF2BP0C7M4 288 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 TYRP14679 529 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 ACVRL1P37023 503 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 PTGIRP43119 386 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 PPIDQ08752 370 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 PPP1R7Q15435 360 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 RNF219Q5W0B1 726 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 HEATR6Q6AI08 1181 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 RHBDF2Q6PJF5 856 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 ZNF783Q6ZMS7 281 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 ARHGAP36Q6ZRI8 547 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 LRRC49Q8IUZ0 686 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 CCDC13Q8IYE1 715 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 ADGRG2Q8IZP9 1017 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 CPA6Q8N4T0 437 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 CCDC89Q8N998 374 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 FAM71DQ8N9W8 422 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 OR52K2Q8NGK3 314 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 UBXN4Q92575 508 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 SLCO2A1Q92959 643 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 FAM83CQ9BQN1 747 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 RHOXF2Q9BQY4 288 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 TRIM51Q9BSJ1 452 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 LRRC1Q9BTT6 524 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 SPON2Q9BUD6 331 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 PHF7Q9BWX1 381 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 EBF3Q9H4W6 596 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 SP110Q9HB58 689 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 SEPT10Q9P0V9 454 aa15.78■□□□□ 0.12
HERPUD1-219ENST00000570273 DOCK4Q8N1I0 1966 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 A0A0D9SEW6 157 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 ANHXE9PGG2 379 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 HOXC11O43248 304 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 STK10O94804 968 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 GDI1P31150 447 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 ETFBP38117 255 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 CSKP41240 450 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 NUMBP49757 651 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 GDF10P55107 478 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 OXCT1P55809 520 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 TUBB4BP68371 445 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 GAD2Q05329 585 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 SERINC3Q13530 473 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 SMAD2Q15796 467 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 KCTD19Q17RG1 926 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 GLE1Q53GS7 698 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 FSCBQ5H9T9 825 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 IL31Q6EBC2 164 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 PTCRAQ6ISU1 281 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 SYDE1Q6ZW31 735 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 ZNF557Q8N988 423 aaPredicted RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 HTR3CQ8WXA8 447 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 ARHGEF2Q92974 986 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 TRMT61BQ9BVS5 477 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 ATP13A1Q9HD20 1204 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 HPS4Q9NQG7 708 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 IPO11Q9UI26 975 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 CLEC4EQ9ULY5 219 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 FAM50BQ9Y247 325 aa15.77■□□□□ 0.12
HERPUD1-219ENST00000570273 CHADO15335 359 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 HEXIM1O94992 359 aaKnown RBP15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 KRT14P02533 472 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 MZF1P28698 734 aaPredicted RBP15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 TNK2Q07912 1038 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 LMAN2Q12907 356 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 PTK6Q13882 451 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 TRIP13Q15645 432 aaPredicted RBP15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 TIGD7Q6NT04 549 aaPredicted RBP15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 MYRIPQ8NFW9 859 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 FIBINQ8TAL6 211 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 TSGA13Q96PP4 275 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 RPP25Q9BUL9 199 aaKnown RBP15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 ECT2Q9H8V3 914 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 PCDH9Q9HC56 1237 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 KIAA1522Q9P206 1035 aaPredicted RBP15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 ASIC3Q9UHC3 531 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 VPS28Q9UK41 221 aa15.77■□□□□ 0.11
HERPUD1-219ENST00000570273 KIF26AQ9ULI4 1882 aaPredicted RBP15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 KCNK1O00180 336 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 RNF103O00237 685 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 MTSS1O43312 755 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 MAFKO60675 156 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 CCNCP24863 283 aa15.76■□□□□ 0.11
HERPUD1-219ENST00000570273 STIP1P31948 543 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms