RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 IGF2RP11717 2491 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 A0A1W2PP55 124 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 C2CD4BA6NLJ0 364 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 E9PAM4 449 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 BCAT2O15382 392 aaPredicted RBP8.04□□□□□ -1.12
CDH3-209ENST00000569080 TEX33O43247 280 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 MOCS3O95396 460 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 GJB6O95452 261 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 F9P00740 461 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 CEACAM1P13688 526 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 STAT1P42224 750 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 ADPRHP54922 357 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 CDH4P55283 916 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 OXCT1P55809 520 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 UBXN1Q04323 297 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 DEUP1Q05D60 604 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 SULT2A1Q06520 285 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 ZNF252P-AS1Q0IIN9 211 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 CLEC16AQ2KHT3 1053 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 C15orf59Q2T9L4 293 aaPredicted RBP8.04□□□□□ -1.12
CDH3-209ENST00000569080 UAP1L1Q3KQV9 507 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 CCDC14Q49A88 953 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 ANO6Q4KMQ2 910 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 E4F1Q66K89 784 aaPredicted RBP8.04□□□□□ -1.12
CDH3-209ENST00000569080 LAYNQ6UX15 382 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 TRIM72Q6ZMU5 477 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 FAM131BQ86XD5 332 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 PHF13Q86YI8 300 aaPredicted RBP8.04□□□□□ -1.12
CDH3-209ENST00000569080 MMAAQ8IVH4 418 aaKnown RBP8.04□□□□□ -1.12
CDH3-209ENST00000569080 CCDC117Q8IWD4 279 aaPredicted RBP8.04□□□□□ -1.12
CDH3-209ENST00000569080 RGL4Q8IZJ4 473 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 STK40Q8N2I9 435 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 DCAF4L2Q8NA75 395 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 MSANTD4Q8NCY6 345 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 DEFB124Q8NES8 71 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 NEK11Q8NG66 645 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 SLC30A5Q8TAD4 765 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 RNF34Q969K3 372 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 C1orf74Q96LT6 269 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 CNTNAP3BQ96NU0 1288 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 SPAG5Q96R06 1193 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 HAPLN3Q96S86 360 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 GTPBP2Q9BX10 602 aaKnown RBP8.04□□□□□ -1.12
CDH3-209ENST00000569080 CNTNAP3Q9BZ76 1288 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 BTBD1Q9H0C5 482 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 SIK2Q9H0K1 926 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 WDCPQ9H6R7 721 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 EBF2Q9HAK2 575 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 IL21RQ9HBE5 538 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 SGK2Q9HBY8 427 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 TM9SF3Q9HD45 589 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 OSGEPQ9NPF4 335 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 EIF2B4Q9UI10 523 aaKnown RBP8.04□□□□□ -1.12
CDH3-209ENST00000569080 VPS51Q9UID3 782 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 SARDHQ9UL12 918 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 FZD4Q9ULV1 537 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 SCML1Q9UN30 329 aa8.04□□□□□ -1.12
CDH3-209ENST00000569080 KNL1Q8NG31 2342 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 A0A0D9SEW6 157 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 RNF103O00237 685 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 SNAP91O60641 907 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 ZMPSTE24O75844 475 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 MT-CO1P00395 513 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 TPM2P07951 284 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 RHOCP08134 193 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 SYPP08247 313 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 SRCP12931 536 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 GNSP15586 552 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 CD27P26842 260 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 SLC8A1P32418 973 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 PTPN9P43378 593 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 GRIA4P48058 902 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 PSMD8P48556 350 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 GALCP54803 685 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 HDAC4P56524 1084 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 FAM193AP78312 1265 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 ATP11AP98196 1134 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 NRG1Q02297 640 aaPredicted RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 ZNF177Q13360 481 aaPredicted RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 IQCB1Q15051 598 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 KCNT1Q5JUK3 1230 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 PPP1R15BQ5SWA1 713 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 AGBL4Q5VU57 503 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 RNF219Q5W0B1 726 aaPredicted RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 KIAA0895LQ68EN5 471 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 NCEH1Q6PIU2 408 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 Q6ZVU0 165 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 TFAP2DQ7Z6R9 452 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 SETD3Q86TU7 594 aaPredicted RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 NLRP14Q86W24 1093 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 SH2D3CQ8N5H7 860 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 C3orf20Q8ND61 904 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 ANKRD20A12PQ8NF67 263 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 RXFP2Q8WXD0 754 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 CENPIQ92674 756 aaPredicted RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 VOPP1Q96AW1 172 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 TMEM121BQ9BXQ6 578 aaPredicted RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 ZDHHC5Q9C0B5 715 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 TTYH3Q9C0H2 523 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms