RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 ERVV-2B6SEH9 535 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 M0QZQ0 153 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 TCERG1O14776 1098 aaKnown RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 DHHO43323 396 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 CCNT2O60583 730 aaKnown RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 BCAR3O75815 825 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 TMIGD3P0DMS9 266 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ATP5F1P24539 256 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 EEF1GP26641 437 aaKnown RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 SLC5A2P31639 672 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 PIP4K2AP48426 406 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF81P51508 661 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 RAE1P78406 368 aaKnown RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 TXNL4AP83876 142 aaKnown RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 BIRC3Q13489 604 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ATP1A4Q13733 1029 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ELF2Q15723 593 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 MPEG1Q2M385 716 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 TMEM196Q5HYL7 178 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 TMTC4Q5T4D3 741 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 IZUMO3Q5VZ72 239 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 FAM90A2PQ658T7 463 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 USP17L6PQ6QN14 398 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 DLK2Q6UY11 383 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 RANBP10Q6VN20 620 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 MMS22LQ6ZRQ5 1243 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 MYLK4Q86YV6 388 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 P3H2Q8IVL5 708 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 CNTROBQ8N137 903 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 CLASRPQ8N2M8 674 aaKnown RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ACRBPQ8NEB7 543 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ABHD5Q8WTS1 349 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 IGFBPL1Q8WX77 278 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF566Q969W8 418 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 WDR12Q9GZL7 423 aaKnown RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 PRSS22Q9GZN4 317 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZCWPW1Q9H0M4 648 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 TAF1DQ9H5J8 278 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 CERS4Q9HA82 394 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 TMOD4Q9NZQ9 345 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 POLKQ9UBT6 870 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 VPS4AQ9UN37 437 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZBTB1Q9Y2K1 713 aa3.81□□□□□ -1.8
HMGB1P6-201ENST00000569046 TONSLQ96HA7 1378 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 AKAP11Q9UKA4 1901 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 SOS1Q07889 1333 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 CYP2D7A0A087X1C5 515 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZSCAN9O15535 394 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 AGR2O95994 175 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 CYP19A1P11511 503 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 CDK4P11802 303 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 DRD1P21728 446 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 HMGB2P26583 209 aaKnown RBP3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 EPHX2P34913 555 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 IL6STP40189 918 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 HSPA7P48741 367 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 GEMIN4P57678 1058 aaKnown RBP3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 CCDC15Q0P6D6 951 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 GAB1Q13480 694 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF268Q14587 947 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 ETFDHQ16134 617 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 Q4G0T1 1027 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 PLEKHO1Q53GL0 409 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 MORN5Q5VZ52 161 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF425Q6IV72 752 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 PRR5LQ6MZQ0 368 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 CCDC174Q6PII3 467 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 PIK3AP1Q6ZUJ8 805 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 CNGA4Q8IV77 575 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 OSR1Q8TAX0 266 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 MAP4K1Q92918 833 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 CAPNS2Q96L46 248 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 NEUROD6Q96NK8 337 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 TAOK3Q9H2K8 898 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 MLXIPLQ9NP71 852 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 NRIP3Q9NQ35 241 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 FSCN3Q9NQT6 498 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 NARFQ9UHQ1 456 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 BCORQ6W2J9 1755 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 UBR2Q8IWV8 1755 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 COL4A5P29400 1685 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 SCN7AQ01118 1682 aa3.8□□□□□ -1.8
HMGB1P6-201ENST00000569046 NCAPD2Q15021 1401 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 E5RJQ4 531 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 PODXLO00592 558 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 RRHO14718 337 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 ZNF500O60304 480 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 TOP3BO95985 862 aaKnown RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 HMOX1P09601 288 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 ALADP13716 330 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 ABCB4P21439 1286 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 LMO1P25800 156 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 CHKAP35790 457 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 EPS15P42566 896 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 RGS19P49795 217 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 DGKQP52824 942 aa3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 WDR5P61964 334 aaKnown RBP3.79□□□□□ -1.8
HMGB1P6-201ENST00000569046 YPEL5P62699 121 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms