RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SERPINB11Q96P15 392 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 NUCKS1Q9H1E3 243 aaKnown RBP12.87□□□□□ -0.35
SNX29-207ENST00000568949 PREBQ9HCU5 417 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 UCKL1Q9NWZ5 548 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 USP25Q9UHP3 1055 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 TLR6Q9Y2C9 796 aa12.87□□□□□ -0.35
SNX29-207ENST00000568949 PIEZO2Q9H5I5 2752 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 PYCARD-AS1I3L0S3 204 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 FFAR2O15552 330 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 PIAS2O75928 621 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 FBXO21O94952 628 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 THEGLP0DJG4 465 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 GIMD1P0DJR0 217 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 VAV1P15498 845 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 STK19P49842 368 aaPredicted RBP12.86□□□□□ -0.35
SNX29-207ENST00000568949 CSRP3P50461 194 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 PLK1P53350 603 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 METAP1P53582 386 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 KCNMA1Q12791 1236 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 CUL2Q13617 745 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 AGBL4Q5VU57 503 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 PMF1Q6P1K2 205 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 NEK5Q6P3R8 708 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 TMC6Q7Z403 805 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 GUF1Q8N442 669 aaKnown RBP12.86□□□□□ -0.35
SNX29-207ENST00000568949 OR8D1Q8WZ84 308 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 CCDC47Q96A33 483 aaKnown RBP12.86□□□□□ -0.35
SNX29-207ENST00000568949 IFT43Q96FT9 208 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 EEF2KMTQ96G04 330 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 APOLD1Q96LR9 279 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 ABCG4Q9H172 646 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 NLGN3Q9NZ94 848 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 TJP2Q9UDY2 1190 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 SARDHQ9UL12 918 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 CA5BQ9Y2D0 317 aa12.86□□□□□ -0.35
SNX29-207ENST00000568949 NEMP2A6NFY4 417 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 C1QTNF3-AMACRE9PGA6 284 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 ALOX15BO15296 676 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 RHOBTB3O94955 611 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 FYNP06241 537 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 RBMS1P29558 406 aaKnown RBP12.85□□□□□ -0.35
SNX29-207ENST00000568949 RGS7P49802 495 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 OXCT1P55809 520 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 CNTN1Q12860 1018 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 ISXQ2M1V0 245 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 LGI2Q8N0V4 545 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 DQX1Q8TE96 717 aaKnown RBP12.85□□□□□ -0.35
SNX29-207ENST00000568949 HSFY1Q96LI6 401 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 SLC46A1Q96NT5 459 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 DUSP23Q9BVJ7 150 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 PPM1HQ9ULR3 514 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 COQ4Q9Y3A0 265 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 PCDHGA8Q9Y5G5 932 aa12.85□□□□□ -0.35
SNX29-207ENST00000568949 LY6G6EA0A0G2JKS1 128 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 RIOK3O14730 519 aaKnown RBP12.84□□□□□ -0.35
SNX29-207ENST00000568949 MCF2LO15068 1137 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 SCAMP1O15126 338 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 ATP9BO43861 1147 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 PAEPP09466 180 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 TACR2P21452 398 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 CNGA2Q16280 664 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 POM121L1PQ3SYA9 428 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 BEND5Q7L4P6 421 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 UBR7Q8N806 425 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 FAM174AQ8TBP5 190 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 MAPK15Q8TD08 544 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 TFAP2BQ92481 460 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 ERCC4Q92889 916 aaPredicted RBP12.84□□□□□ -0.35
SNX29-207ENST00000568949 PPP1R9BQ96SB3 815 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 OSBPL2Q9H1P3 480 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 XPO7Q9UIA9 1087 aaKnown RBP12.84□□□□□ -0.35
SNX29-207ENST00000568949 SATB2Q9UPW6 733 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 U3KQA8 63 aa12.84□□□□□ -0.35
SNX29-207ENST00000568949 K7ESM1 405 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 PIK3R2O00459 728 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 SLC31A1O15431 190 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 MOCS2O96007 188 aaPredicted RBP12.83□□□□□ -0.36
SNX29-207ENST00000568949 APOEP02649 317 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 EPB41P11171 864 aaKnown RBP12.83□□□□□ -0.36
SNX29-207ENST00000568949 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 TBXAS1P24557 533 aaPredicted RBP12.83□□□□□ -0.36
SNX29-207ENST00000568949 AKT2P31751 481 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 MLLT3P42568 568 aaPredicted RBP12.83□□□□□ -0.36
SNX29-207ENST00000568949 TAS2R38P59533 333 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 NUCB2P80303 420 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 CCDC15Q0P6D6 951 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 STILQ15468 1287 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 ZNF284Q2VY69 593 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 CBWD6Q4V339 395 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 C3orf38Q5JPI3 329 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 KIAA1614Q5VZ46 1190 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 RAP1GAP2Q684P5 730 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 XKR5Q6UX68 686 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 ABI3BPQ7Z7G0 1075 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 CHSY1Q86X52 802 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms