RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 AOC1P19801 751 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 ETFBP38117 255 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 CDKN2BP42772 138 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 KIR2DL1P43626 348 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-224ENST00000568877 NUMBP49757 651 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 YBEYP58557 167 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-224ENST00000568877 MRPS21P82921 87 aaKnown RBP17.16■□□□□ 0.34
COMMD4-224ENST00000568877 TAZQ16635 292 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 PARP15Q460N3 678 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 SPOCD1Q6ZMY3 1216 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 NPWQ8N729 165 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 PQLC3Q8N755 202 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 OR7D4Q8NG98 312 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 SORCS1Q8WY21 1168 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 ARHGEF2Q92974 986 aaKnown RBP17.16■□□□□ 0.34
COMMD4-224ENST00000568877 TRIM44Q96DX7 344 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-224ENST00000568877 PSMB7Q99436 277 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 SPON2Q9BUD6 331 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 MAK16Q9BXY0 300 aaKnown RBP17.16■□□□□ 0.34
COMMD4-224ENST00000568877 ACE2Q9BYF1 805 aaPredicted RBP17.16■□□□□ 0.34
COMMD4-224ENST00000568877 LRRC19Q9H756 370 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 HCN2Q9UL51 889 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 MFHAS1Q9Y4C4 1052 aa17.16■□□□□ 0.34
COMMD4-224ENST00000568877 TTC28Q96AY4 2481 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 DOCK4Q8N1I0 1966 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 RASA4BC9J798 803 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 RASA4O43374 803 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 PI15O43692 258 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 ASLP04424 464 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 DCNP07585 359 aaKnown RBP17.15■□□□□ 0.34
COMMD4-224ENST00000568877 DLDP09622 509 aaKnown RBP17.15■□□□□ 0.34
COMMD4-224ENST00000568877 CHRM1P11229 460 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-224ENST00000568877 HNRNPLP14866 589 aaKnown RBP eCLIP17.15■□□□□ 0.34
COMMD4-224ENST00000568877 TIE1P35590 1138 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 ACVRL1P37023 503 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 RPS9P46781 194 aaKnown RBP17.15■□□□□ 0.34
COMMD4-224ENST00000568877 COPS2P61201 443 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 SULT2A1Q06520 285 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 E2F5Q15329 346 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 RPS6KA1Q15418 735 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 C2orf27AQ580R0 203 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 TFDP3Q5H9I0 405 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 ZNF569Q5MCW4 686 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 AFMIDQ63HM1 303 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 EGFLAMQ63HQ2 1017 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 IL31Q6EBC2 164 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 RFX6Q8HWS3 928 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 CCDC50Q8IVM0 306 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 FBXL6Q8N531 539 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 ZNF513Q8N8E2 541 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-224ENST00000568877 DCAF4L2Q8NA75 395 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-224ENST00000568877 USP33Q8TEY7 942 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 CYB5D2Q8WUJ1 264 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 CELF6Q96J87 481 aaKnown RBP17.15■□□□□ 0.34
COMMD4-224ENST00000568877 C2orf49Q9BVC5 232 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-224ENST00000568877 PRDM16Q9HAZ2 1276 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 ATP13A1Q9HD20 1204 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 PLA2G4CQ9UP65 541 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 MIA3Q5JRA6 1907 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 TECTAO75443 2155 aa17.15■□□□□ 0.34
COMMD4-224ENST00000568877 FAM86C2PA6NEL3 165 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 PYGMP11217 842 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 KRT10P13645 584 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 MSNP26038 577 aaKnown RBP17.14■□□□□ 0.33
COMMD4-224ENST00000568877 SERPINB6P35237 376 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 CTSOP43234 321 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-224ENST00000568877 MAGEA9P43362 315 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 DNA2P51530 1060 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 ECT2LQ008S8 904 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 PAFAH1B3Q15102 231 aaKnown RBP17.14■□□□□ 0.33
COMMD4-224ENST00000568877 PPP2R5EQ16537 467 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 NCBP2-AS2Q69YL0 99 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 SLC9A4Q6AI14 798 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 Q6ZS52 159 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 ARHGAP12Q8IWW6 846 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 RPLP0P6Q8NHW5 317 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 ACDQ96AP0 544 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 HMCESQ96FZ2 354 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 SLC39A8Q9C0K1 460 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 CHRDQ9H2X0 955 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 C11orf16Q9NQ32 467 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 DLGAP2Q9P1A6 1054 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 THAP10Q9P2Z0 257 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-224ENST00000568877 ERVW-1Q9UQF0 538 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 JRKLQ9Y4A0 524 aa17.14■□□□□ 0.33
COMMD4-224ENST00000568877 NCOR1O75376 2440 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 hCG_1818297A0A087WSY0 165 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 ARHGAP42A6NI28 874 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 CBX4O00257 560 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 APOL1O14791 398 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 NPC1O15118 1278 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 KDELR3O43731 214 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 SNAP91O60641 907 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 SRPRAP08240 638 aaKnown RBP17.13■□□□□ 0.33
COMMD4-224ENST00000568877 ZFXP17010 805 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-224ENST00000568877 GLDCP23378 1020 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 CETN2P41208 172 aa17.13■□□□□ 0.33
COMMD4-224ENST00000568877 PAPOLAP51003 745 aaKnown RBP17.13■□□□□ 0.33
COMMD4-224ENST00000568877 SERINC3Q13530 473 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms