RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SLC35C1Q96A29 364 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 SKA1Q96BD8 255 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 SPATA32Q96LK8 384 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 CFAP45Q9UL16 551 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 COQ4Q9Y3A0 265 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 SNX10Q9Y5X0 201 aa15.32■□□□□ 0.04
USB1-214ENST00000568848 ADH1BP00325 375 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 CTSLP07711 333 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 C1SP09871 688 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 GABREP78334 506 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 DRAP1Q14919 205 aaPredicted RBP15.31■□□□□ 0.04
USB1-214ENST00000568848 EDRF1Q3B7T1 1238 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 ACCSLQ4AC99 568 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 CXorf57Q6NSI4 855 aaKnown RBP15.31■□□□□ 0.04
USB1-214ENST00000568848 PRPF39Q86UA1 669 aaKnown RBP15.31■□□□□ 0.04
USB1-214ENST00000568848 CCAR2Q8N163 923 aaKnown RBP15.31■□□□□ 0.04
USB1-214ENST00000568848 SCML4Q8N228 414 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 PPM1KQ8N3J5 372 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 TTC39CQ8N584 583 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 MFSD2AQ8NA29 543 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 IRGQQ8WZA9 623 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 CCDC47Q96A33 483 aaKnown RBP15.31■□□□□ 0.04
USB1-214ENST00000568848 USP25Q9UHP3 1055 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 TLR6Q9Y2C9 796 aa15.31■□□□□ 0.04
USB1-214ENST00000568848 COL27A1Q8IZC6 1860 aaPredicted RBP15.31■□□□□ 0.04
USB1-214ENST00000568848 LY6G6EA0A0G2JKS1 128 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 TYW5A2RUC4 315 aaKnown RBP15.3■□□□□ 0.04
USB1-214ENST00000568848 K7ERQ8 282 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 TK2O00142 265 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 PLRG1O43660 514 aaKnown RBP15.3■□□□□ 0.04
USB1-214ENST00000568848 RNGTTO60942 597 aaKnown RBP15.3■□□□□ 0.04
USB1-214ENST00000568848 THEGLP0DJG4 465 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 DGKAP23743 735 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 ACP1P24666 158 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 ACTN2P35609 894 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 ENPEPQ07075 957 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 ELAVL3Q14576 367 aaKnown RBP15.3■□□□□ 0.04
USB1-214ENST00000568848 ARID5BQ14865 1188 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 KIAA1614Q5VZ46 1190 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 OR6B2Q6IFH4 312 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 C14orf80Q86SX3 495 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 SLC22A18ASQ8N1D0 253 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 OR13H1Q8NG92 308 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 ARRDC3Q96B67 414 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 SERPINB11Q96P15 392 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 CALN1Q9BXU9 219 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 U3KQA8 63 aa15.3■□□□□ 0.04
USB1-214ENST00000568848 FAM237AA0A1B0GTK4 181 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 A0A1W2PQU0 124 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 E5RJQ4 531 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 USP12O75317 370 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 CSO75390 466 aaKnown RBP15.29■□□□□ 0.04
USB1-214ENST00000568848 GRAP2O75791 330 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 ZNF202O95125 648 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 MOCS3O95396 460 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 TRUB2O95900 331 aaKnown RBP15.29■□□□□ 0.04
USB1-214ENST00000568848 MT-CO1P00395 513 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 MYL1P05976 194 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 FMO5P49326 533 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 SFSWAPQ12872 951 aaKnown RBP15.29■□□□□ 0.04
USB1-214ENST00000568848 STAT4Q14765 748 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 CNGA2Q16280 664 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 SLC45A4Q5BKX6 768 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 SEL1L3Q68CR1 1132 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 RFFLQ8WZ73 363 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 AZIN2Q96A70 460 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 ALG14Q96F25 216 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 HIC2Q96JB3 615 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 KREMEN1Q96MU8 473 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 PRMT1Q99873 361 aaKnown RBP15.29■□□□□ 0.04
USB1-214ENST00000568848 ERVMER34-1Q9H9K5 563 aa15.29■□□□□ 0.04
USB1-214ENST00000568848 TEX51A0A1B0GUA7 166 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 J3QKU1 62 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 YKT6O15498 198 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 KLK10O43240 276 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 OPA1O60313 960 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 STX10O60499 249 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 SNAP91O60641 907 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 PAEPP09466 180 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 GPD2P43304 727 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 APBA1Q02410 837 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 DLG2Q15700 870 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 TPRG1LQ5T0D9 272 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 PIP5KL1Q5T9C9 394 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 CCDC117Q8IWD4 279 aaPredicted RBP15.28■□□□□ 0.04
USB1-214ENST00000568848 KDM1BQ8NB78 822 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 CHST14Q8NCH0 376 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 LMO3Q8TAP4 145 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 FAM131CQ96AQ9 280 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 KLHDC7BQ96G42 594 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 APOLD1Q96LR9 279 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 NT5C1BQ96P26 610 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 SPAG5Q96R06 1193 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 DDX50Q9BQ39 737 aaKnown RBP15.28■□□□□ 0.04
USB1-214ENST00000568848 ANLNQ9NQW6 1124 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 ARMCX3Q9UH62 379 aaPredicted RBP15.28■□□□□ 0.04
USB1-214ENST00000568848 PPM1HQ9ULR3 514 aa15.28■□□□□ 0.04
USB1-214ENST00000568848 ZFR2Q9UPR6 939 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms