RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	ACAD10	Q6JQN1	1059 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	RWDD4	Q6NW29	188 aa	Known RBP	10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	SCYL2	Q6P3W7	929 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	ZNF783	Q6ZMS7	281 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	PHLDB2	Q86SQ0	1253 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	MMAA	Q8IVH4	418 aa	Known RBP	10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	EMC1	Q8N766	993 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	DNASE2B	Q8WZ79	361 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	IQCD	Q96DY2	449 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	MYEOV	Q96EZ4	313 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	VCPIP1	Q96JH7	1222 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	LMLN	Q96KR4	655 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	SPON2	Q9BUD6	331 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	EDEM3	Q9BZQ6	932 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	PABPC3	Q9H361	631 aa	Known RBP	10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	DYRK4	Q9NR20	520 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	RXFP3	Q9NSD7	469 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	OR12D3	Q9UGF7	316 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	SLCO3A1	Q9UIG8	710 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	TBC1D30	Q9Y2I9	924 aa		10.65	□□□□□ -0.7
UBR1-207	ENST00000568782	MUC22	E2RYF6	1773 aa	Predicted RBP	10.65	□□□□□ -0.71
UBR1-207	ENST00000568782		A0A1B0GTH6	734 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	C2CD4B	A6NLJ0	364 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	DRGX	A6NNA5	263 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	ALOX15B	O15296	676 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	ENDOD1	O94919	500 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	FSBP	O95073	299 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	CER1	O95813	267 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	TFE3	P19532	575 aa	Predicted RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	ACSL1	P33121	698 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	ADRA1B	P35368	520 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	GGCX	P38435	758 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	CTSO	P43234	321 aa	Predicted RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	PSMD8	P48556	350 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	VASP	P50552	380 aa	Predicted RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	NOVA1	P51513	510 aa	Known RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	AFF3	P51826	1226 aa	Known RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	GSC	P56915	257 aa	Predicted RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	GEMIN4	P57678	1058 aa	Known RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	SLC20A2	Q08357	652 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	KLHL30	Q0D2K2	578 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	DLG2	Q15700	870 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	C15orf59	Q2T9L4	293 aa	Predicted RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	SLC45A4	Q5BKX6	768 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	EFHC2	Q5JST6	749 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	C9orf64	Q5T6V5	341 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	CXorf57	Q6NSI4	855 aa	Known RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	TFAP2D	Q7Z6R9	452 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	SLFN11	Q7Z7L1	901 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	C14orf80	Q86SX3	495 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	ZNF354C	Q86Y25	554 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	STK40	Q8N2I9	435 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	MINDY1	Q8N5J2	469 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	FAM172A	Q8WUF8	416 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	TRIM11	Q96F44	468 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	MRGPRX3	Q96LB0	322 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	HSD3B7	Q9H2F3	369 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	CD93	Q9NPY3	652 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	PARVA	Q9NVD7	372 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	MPP6	Q9NZW5	540 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	PPARGC1A	Q9UBK2	798 aa	Known RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	EIF2B4	Q9UI10	523 aa	Known RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	FZD4	Q9ULV1	537 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	PCDHB9	Q9Y5E1	797 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	BZW2	Q9Y6E2	419 aa	Known RBP	10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	NUMA1	Q14980	2115 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	CEP250	Q9BV73	2442 aa		10.64	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3D	A0A087WVF3	549 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3I	A0A087WXS9	549 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3E	A0A087X179	549 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3K	A0A087X1G2	549 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782		A0A1W2PP55	124 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	ILVBL	A1L0T0	632 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	LRRC53	A6NM62	1247 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TMCO5B	A8MYB1	307 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3L	B9A6J9	549 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	CBX4	O00257	560 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	MID1	O15344	667 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	ATP9B	O43861	1147 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	RNF8	O76064	485 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	CNTN5	O94779	1100 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3H	P0C7X1	549 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	CEACAM1	P13688	526 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	GOT1	P17174	413 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	RFC1	P35251	1148 aa	Predicted RBP	10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	NUMB	P49757	651 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	STK19	P49842	368 aa	Predicted RBP	10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	CLCN6	P51797	869 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	AIF1	P55008	147 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	SLC14A1	Q13336	389 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	HNRNPD	Q14103	355 aa	Known RBP	10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	CCDC14	Q49A88	953 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	ALF	Q53S48	1182 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TDRD12	Q587J7	1177 aa	Known RBP	10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3G	Q6DHY5	549 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	TBC1D3C	Q6IPX1	549 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	WDR59	Q6PJI9	974 aa		10.63	□□□□□ -0.71
UBR1-207	ENST00000568782	APTX	Q7Z2E3	356 aa	Known RBP	10.63	□□□□□ -0.71

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