RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ADRA1BP35368 520 aa30.19■■■□□ 2.42
RAB40C-211ENST00000568586 ATP11AP98196 1134 aa30.19■■■□□ 2.42
RAB40C-211ENST00000568586 SFSWAPQ12872 951 aaKnown RBP30.19■■■□□ 2.42
RAB40C-211ENST00000568586 ELAVL3Q14576 367 aaKnown RBP30.19■■■□□ 2.42
RAB40C-211ENST00000568586 NAP1L5Q96NT1 182 aaPredicted RBP30.19■■■□□ 2.42
RAB40C-211ENST00000568586 C6orf106Q9H6K1 298 aaPredicted RBP30.19■■■□□ 2.42
RAB40C-211ENST00000568586 PPARGC1AQ9UBK2 798 aaKnown RBP30.19■■■□□ 2.42
RAB40C-211ENST00000568586 ADAMTS1Q9UHI8 967 aa30.19■■■□□ 2.42
RAB40C-211ENST00000568586 VPS28Q9UK41 221 aa30.19■■■□□ 2.42
RAB40C-211ENST00000568586 HS3ST2Q9Y278 367 aa30.19■■■□□ 2.42
RAB40C-211ENST00000568586 A0A1B0GTW7 788 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 UPK3BL1B0FP48 263 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 UPK3BL2E5RIL1 263 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 SEMA4FO95754 770 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 NR1I3Q14994 352 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 C15orf59Q2T9L4 293 aaPredicted RBP30.18■■■□□ 2.42
RAB40C-211ENST00000568586 RAB6CQ53S08 254 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 SH3PXD2AQ5TCZ1 1133 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 PHLDB2Q86SQ0 1253 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 PSMB7Q99436 277 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 RAB6CQ9H0N0 254 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 OSBPL2Q9H1P3 480 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 RETREG1Q9H6L5 497 aa30.18■■■□□ 2.42
RAB40C-211ENST00000568586 ZBTB32Q9Y2Y4 487 aaPredicted RBP30.18■■■□□ 2.42
RAB40C-211ENST00000568586 SYCE3A1L190 88 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 KCNK5O95279 499 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 SYPP08247 313 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 CSRP1P21291 193 aaKnown RBP30.17■■■□□ 2.42
RAB40C-211ENST00000568586 MANEALQ5VSG8 457 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 WDR59Q6PJI9 974 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 ZNF783Q6ZMS7 281 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 MMAAQ8IVH4 418 aaKnown RBP30.17■■■□□ 2.42
RAB40C-211ENST00000568586 STK40Q8N2I9 435 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 EDEM3Q9BZQ6 932 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 TTYH3Q9C0H2 523 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 OSGEPQ9NPF4 335 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 FBXL12Q9NXK8 326 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 AIPL1Q9NZN9 384 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 MPP6Q9NZW5 540 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 SLC25A13Q9UJS0 675 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 FZD4Q9ULV1 537 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 NCKAP1Q9Y2A7 1128 aa30.17■■■□□ 2.42
RAB40C-211ENST00000568586 MID1O15344 667 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 GJB6O95452 261 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 SLC8A1P32418 973 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 MAPK8P45983 427 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 HDAC4P56524 1084 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 ARL13BQ3SXY8 428 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 PPP1R15BQ5SWA1 713 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 C6orf118Q5T5N4 469 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 ACAD10Q6JQN1 1059 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 SH2D3CQ8N5H7 860 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 FAM131CQ96AQ9 280 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 VCPIP1Q96JH7 1222 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 C2orf49Q9BVC5 232 aaPredicted RBP30.16■■■□□ 2.42
RAB40C-211ENST00000568586 SELENOOQ9BVL4 669 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 ZDHHC5Q9C0B5 715 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 ZYG11BQ9C0D3 744 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 MUC3BQ9H195 1237 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 FSCN3Q9NQT6 498 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 DNAAF2Q9NVR5 837 aaKnown RBP30.16■■■□□ 2.42
RAB40C-211ENST00000568586 SERGEFQ9UGK8 458 aa30.16■■■□□ 2.42
RAB40C-211ENST00000568586 DOCK4Q8N1I0 1966 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 ILVBLA1L0T0 632 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 ADH1BP00325 375 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 RHOCP08134 193 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 VAV1P15498 845 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 PTMSP20962 102 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 C5AR1P21730 350 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 KRT83P78385 493 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 PPP1R2P3Q6NXS1 205 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 MCOLN2Q8IZK6 566 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 DCAF4L2Q8NA75 395 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 NTAN1Q96AB6 310 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 CBX8Q9HC52 389 aa30.15■■■□□ 2.42
RAB40C-211ENST00000568586 EIF2B4Q9UI10 523 aaKnown RBP30.15■■■□□ 2.42
RAB40C-211ENST00000568586 LRRC53A6NM62 1247 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 BCAT2O15382 392 aaPredicted RBP30.14■■■□□ 2.42
RAB40C-211ENST00000568586 SRGAP2O75044 1071 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 GJB3O75712 270 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 PRKCIP41743 596 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 NUMBP49757 651 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 SEMA3BQ13214 749 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 DLG2Q15700 870 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 CDO1Q16878 200 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 FIGNQ5HY92 759 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 ZCCHC9Q8N567 271 aaKnown RBP30.14■■■□□ 2.42
RAB40C-211ENST00000568586 BIRC7Q96CA5 298 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 ORAI3Q9BRQ5 295 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 NEUROG2Q9H2A3 272 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 SEPT11Q9NVA2 429 aaKnown RBP30.14■■■□□ 2.42
RAB40C-211ENST00000568586 OR12D3Q9UGF7 316 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 VPS51Q9UID3 782 aa30.14■■■□□ 2.42
RAB40C-211ENST00000568586 A0A0D9SEW6 157 aa30.13■■■□□ 2.41
RAB40C-211ENST00000568586 ALOX15BO15296 676 aa30.13■■■□□ 2.41
RAB40C-211ENST00000568586 GOT1P17174 413 aa30.13■■■□□ 2.41
RAB40C-211ENST00000568586 GPD1P21695 349 aa30.13■■■□□ 2.41
RAB40C-211ENST00000568586 OR1E1P30953 314 aa30.13■■■□□ 2.41
RAB40C-211ENST00000568586 ZNF143P52747 638 aaPredicted RBP30.13■■■□□ 2.41
RAB40C-211ENST00000568586 ATXN3P54252 364 aaPredicted RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 731.1 ms