RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 METAP1P53582 386 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 KCNC4Q03721 635 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 VAC14Q08AM6 782 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 SLC12A1Q13621 1099 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 LY6DQ14210 128 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 POM121L1PQ3SYA9 428 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 CBWD6Q4V339 395 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 DCAF17Q5H9S7 520 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 CBWD3Q5JTY5 395 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 CBWD5Q5RIA9 395 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 AGBL4Q5VU57 503 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 CHSY1Q86X52 802 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 LGI2Q8N0V4 545 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 TMEM145Q8NBT3 493 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 CLEC4CQ8WTT0 213 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 HSFY1Q96LI6 401 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 PREBQ9HCU5 417 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 EVA1BQ9NVM1 165 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 UCKL1Q9NWZ5 548 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 CA5BQ9Y2D0 317 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 COQ4Q9Y3A0 265 aa12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 TP53BP1Q12888 1972 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-209ENST00000568569 A0A1B0GVL5 298 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 M0QYV0 167 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 CETN3O15182 167 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 ARHGAP6O43182 974 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 SART1O43290 800 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 F13A1P00488 732 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 APOEP02649 317 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 PAEPP09466 180 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 THEGLP0DJG4 465 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 ZSCAN22P10073 491 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 NUCB2P80303 420 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 KCNMA1Q12791 1236 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 CNTN1Q12860 1018 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 STILQ15468 1287 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 TCERG1LQ5VWI1 586 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 RAP1GAP2Q684P5 730 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 IGF2-ASQ6U949 168 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 TMC6Q7Z403 805 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 UBR7Q8N806 425 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 FRS2Q8WU20 508 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 TFAP2BQ92481 460 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 MED8Q96G25 268 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 VCPIP1Q96JH7 1222 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 MIS12Q9H081 205 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 ABCG4Q9H172 646 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 USP29Q9HBJ7 922 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 ASCL3Q9NQ33 180 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 NLGN3Q9NZ94 848 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 XPO7Q9UIA9 1087 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 RCOR1Q9UKL0 485 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 SARDHQ9UL12 918 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 BOD1L1Q8NFC6 3051 aa12.16□□□□□ -0.46
GTF3C1-209ENST00000568569 COL12A1Q99715 3063 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 PIEZO2Q9H5I5 2752 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 F5H5T6 163 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 PYCARD-AS1I3L0S3 204 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 ALOX15BO15296 676 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 SLC31A1O15431 190 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 SLC28A2O43868 658 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 PIAS2O75928 621 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 FYNP06241 537 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 PRR29P0C7W0 189 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 GIMD1P0DJR0 217 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 PDGFRAP16234 1089 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 TACR2P21452 398 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 CMA1P23946 247 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 VASPP50552 380 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 DUSP3P51452 185 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 OXCT1P55809 520 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 DPYDQ12882 1025 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 CNGA2Q16280 664 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 ACCSLQ4AC99 568 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 TTC39BQ5VTQ0 682 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 TMEM270Q6UE05 265 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 TAC4Q86UU9 113 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 CCAR2Q8N163 923 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 FAM149B1Q96BN6 582 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 CCDC97Q96F63 343 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 BTN2A3PQ96KV6 586 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 APOLD1Q96LR9 279 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 MYOCQ99972 504 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 TRIM62Q9BVG3 475 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 DUSP23Q9BVJ7 150 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 PPM1HQ9ULR3 514 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 NAALADL1Q9UQQ1 740 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 HPSEQ9Y251 543 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
GTF3C1-209ENST00000568569 TCAF2A6NFQ2 919 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 NEMP2A6NFY4 417 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 K7ENP7 123 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 MCF2LO15068 1137 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 ATP9BO43861 1147 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 LZTS3O60299 673 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 WISP1O95388 367 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 PRLRP16471 622 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 ZNF18P17022 549 aa12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 RBMS1P29558 406 aaKnown RBP12.14□□□□□ -0.47
GTF3C1-209ENST00000568569 AKT2P31751 481 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms