RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 ERVW-1Q9UQF0 538 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.28□□□□□ -0.28
TSC2-220ENST00000568238 CABIN1Q9Y6J0 2220 aa13.28□□□□□ -0.28
TSC2-220ENST00000568238 SPAARA0A1B0GVQ0 90 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 CER1O95813 267 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 CYP1A1P04798 512 aaPredicted RBP13.27□□□□□ -0.29
TSC2-220ENST00000568238 SERPING1P05155 500 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 PLEKP08567 350 aaPredicted RBP13.27□□□□□ -0.29
TSC2-220ENST00000568238 CD59P13987 128 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 PDGFRAP16234 1089 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 TNFAIP3P21580 790 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 CDH5P33151 784 aaPredicted RBP13.27□□□□□ -0.29
TSC2-220ENST00000568238 NOS2P35228 1153 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 AFF3P51826 1226 aaKnown RBP13.27□□□□□ -0.29
TSC2-220ENST00000568238 CENPCQ03188 943 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 SFSWAPQ12872 951 aaKnown RBP13.27□□□□□ -0.29
TSC2-220ENST00000568238 NME3Q13232 169 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 SLC12A1Q13621 1099 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 CST6Q15828 149 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 CLEC16AQ2KHT3 1053 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 TSR1Q2NL82 804 aaKnown RBP13.27□□□□□ -0.29
TSC2-220ENST00000568238 C2CD6Q53TS8 623 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 C9orf64Q5T6V5 341 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 HGSNATQ68CP4 663 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 IL27RAQ6UWB1 636 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 USP30Q70CQ3 517 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 CNGA4Q8IV77 575 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 APCDD1Q8J025 514 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 CCAR2Q8N163 923 aaKnown RBP13.27□□□□□ -0.29
TSC2-220ENST00000568238 OR8K1Q8NGG5 319 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 C1orf216Q8TAB5 229 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 GANCQ8TET4 914 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 RPRD1AQ96P16 312 aaPredicted RBP13.27□□□□□ -0.29
TSC2-220ENST00000568238 SYT11Q9BT88 431 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 ABHD10Q9NUJ1 306 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 ZNHIT6Q9NWK9 470 aaKnown RBP13.27□□□□□ -0.29
TSC2-220ENST00000568238 RRN3Q9NYV6 651 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 WASF3Q9UPY6 502 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 NCKAP1Q9Y2A7 1128 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 DOCK4Q8N1I0 1966 aa13.27□□□□□ -0.29
TSC2-220ENST00000568238 TARSL2A2RTX5 802 aaKnown RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 TMCO5BA8MYB1 307 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 TTC34A8MYJ7 566 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 M0QYT0 321 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 LAMA5O15230 3695 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 MID1O15344 667 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 FSBPO95073 299 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 DSPP15924 2871 aaKnown RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 CDC25BP30305 580 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 MATKP42679 507 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 NSFP46459 744 aaKnown RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 NUMBP49757 651 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 STK19P49842 368 aaPredicted RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 OXCT1P55809 520 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 SULT2A1Q06520 285 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 AUHQ13825 339 aaKnown RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 HNRNPDQ14103 355 aaKnown RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 OTUD1Q5VV17 481 aaPredicted RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 CXorf57Q6NSI4 855 aaKnown RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 FBXL22Q6P050 247 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 ERICH1Q86X53 443 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 MMAAQ8IVH4 418 aaKnown RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 NAXDQ8IW45 347 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 MSANTD4Q8NCY6 345 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 BIRC7Q96CA5 298 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 RPL10LQ96L21 214 aaKnown RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 C11orf70Q9BRQ4 267 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.26□□□□□ -0.29
TSC2-220ENST00000568238 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 FBXL12Q9NXK8 326 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.26□□□□□ -0.29
TSC2-220ENST00000568238 SLCO3A1Q9UIG8 710 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 VANGL2Q9ULK5 521 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 STAP1Q9ULZ2 295 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 HS3ST4Q9Y661 456 aa13.26□□□□□ -0.29
TSC2-220ENST00000568238 BZW2Q9Y6E2 419 aaKnown RBP13.26□□□□□ -0.29
TSC2-220ENST00000568238 ANKRD11Q6UB99 2663 aaPredicted RBP13.25□□□□□ -0.29
TSC2-220ENST00000568238 A0A1B0GVT2 93 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 A0A1W2PP55 124 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 FAM47DPA6NHR8 397 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 GOLGA8SH3BPF8 625 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 DDX3XO00571 662 aaKnown RBP eCLIP13.25□□□□□ -0.29
TSC2-220ENST00000568238 SH3BP5O60239 455 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 PAGE1O75459 146 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 RNASEH2AO75792 299 aaKnown RBP13.25□□□□□ -0.29
TSC2-220ENST00000568238 TOP3BO95985 862 aaKnown RBP13.25□□□□□ -0.29
TSC2-220ENST00000568238 ADH1BP00325 375 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 ZNF883P0CG24 379 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
TSC2-220ENST00000568238 SPINK2P20155 84 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 CD27P26842 260 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 MZF1P28698 734 aaPredicted RBP13.25□□□□□ -0.29
TSC2-220ENST00000568238 HNRNPH3P31942 346 aaKnown RBP13.25□□□□□ -0.29
TSC2-220ENST00000568238 GGCXP38435 758 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 NNMTP40261 264 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 PSMD8P48556 350 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
TSC2-220ENST00000568238 BNC1Q01954 994 aa13.25□□□□□ -0.29
TSC2-220ENST00000568238 ELAVL3Q14576 367 aaKnown RBP13.25□□□□□ -0.29
TSC2-220ENST00000568238 TEAD4Q15561 434 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms