RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 PCDHB8Q9UN66 801 aa18.13■□□□□ 0.49
CMTM3-214ENST00000567572 NLRC5Q86WI3 1866 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-214ENST00000567572 SPECC1L-ADORA2AF8WAN1 911 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 TMEM189-UBE2V1I3L0A0 370 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 NBNO60934 754 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 GSRP00390 522 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 FYNP06241 537 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 COL6A1P12109 1028 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 AOC1P19801 751 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 MX2P20592 715 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 DNAJB2P25686 324 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 PSMB4P28070 264 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 PTDSS1P48651 473 aaKnown RBP18.12■□□□□ 0.49
CMTM3-214ENST00000567572 PITX1P78337 314 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-214ENST00000567572 BFSP2Q13515 415 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 NAA25Q14CX7 972 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 CCDC153Q494R4 210 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 SYPL2Q5VXT5 272 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 TTC7BQ86TV6 843 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 COLGALT2Q8IYK4 626 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 ZNF567Q8N184 647 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 ZNF784Q8NCA9 323 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-214ENST00000567572 TTC8Q8TAM2 541 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 STMN2Q93045 179 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 MIEF2Q96C03 454 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 CERS2Q96G23 380 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 CCDC106Q9BWC9 280 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 PAK6Q9NQU5 681 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-214ENST00000567572 TBC1D13Q9NVG8 400 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 TMLHEQ9NVH6 421 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 TMEM161AQ9NX61 479 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 TRHDEQ9UKU6 1024 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 MFHAS1Q9Y4C4 1052 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 PTPRDP23468 1912 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 PATJQ8NI35 1801 aa18.12■□□□□ 0.49
CMTM3-214ENST00000567572 YJEFN3A6XGL0 299 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 TPP1O14773 563 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 AP2A1O95782 977 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 ALOX15P16050 662 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 ADRA1BP35368 520 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 PGM1P36871 562 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 VHLP40337 213 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 SESN2P58004 480 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 PDE1CQ14123 709 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 TRMT5Q32P41 509 aaKnown RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 HSF5Q4G112 596 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 N4BP2L1Q5TBK1 243 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 BHLHA9Q7RTU4 235 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 LRRTM3Q86VH5 581 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 RASSF3Q86WH2 238 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 LRRN4Q8WUT4 740 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 PRR11Q96HE9 360 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 TMEM209Q96SK2 561 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 TRIM56Q9BRZ2 755 aaKnown RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 MAGEB5Q9BZ81 275 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 STX18Q9P2W9 335 aaKnown RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 EMCNQ9ULC0 261 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 CCDC195A0A1B0GUA6 201 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 MAGEB16A2A368 324 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 F9P00740 461 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 FGF3P11487 239 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 ZNF33AQ06730 810 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 PPIDQ08752 370 aaKnown RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 BLMHQ13867 455 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 MAPRE1Q15691 268 aaKnown RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 ARL13BQ3SXY8 428 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 KHDC1Q4VXA5 237 aaKnown RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 C6orf163Q5TEZ5 329 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 CES4AQ5XG92 561 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 ITPRIPL1Q6GPH6 555 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 RFWD3Q6PCD5 774 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 NET1Q7Z628 596 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 THEM5Q8N1Q8 247 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 CCNYQ8ND76 341 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 PPP4R1Q8TF05 950 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 ELAC1Q9H777 363 aaKnown RBP18.11■□□□□ 0.49
CMTM3-214ENST00000567572 SYBUQ9NX95 663 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 DNAJB4Q9UDY4 337 aa18.11■□□□□ 0.49
CMTM3-214ENST00000567572 PITPNM1O00562 1244 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 USP1O94782 785 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 KLHL2O95198 593 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 PROCP04070 461 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 BDNFP23560 247 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 SERPINB6P35237 376 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 SERPINB8P50452 374 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 PDE1BQ01064 536 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 TSPY1Q01534 308 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 SLC34A1Q06495 639 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 CCDC6Q16204 474 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 TEDDM1Q5T9Z0 273 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 LMNTD2Q8IXW0 634 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 SCML4Q8N228 414 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 HDAC11Q96DB2 347 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 DMAP1Q9NPF5 467 aaPredicted RBP18.1■□□□□ 0.49
CMTM3-214ENST00000567572 PIGVQ9NUD9 493 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 DNAJC28Q9NX36 388 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 BFARQ9NZS9 450 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 ZNF212Q9UDV6 495 aa18.1■□□□□ 0.49
CMTM3-214ENST00000567572 B2RBV5 119 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms