RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 PCDHA13Q9Y5I0 950 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 RAD54BQ9Y620 910 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 NUP205Q92621 2012 aa12.74□□□□□ -0.37
RNF40-211ENST00000567365 SPAG17Q6Q759 2223 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 A0A0A6YYK5 440 aaPredicted RBP12.73□□□□□ -0.37
RNF40-211ENST00000567365 HRO43593 1189 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 ATP9BO43861 1147 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 CD160O95971 181 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 RHOCP08134 193 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 HLA-EP13747 358 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 DESP17661 470 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 IL4RP24394 825 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 OR1E1P30953 314 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 STK19P49842 368 aaPredicted RBP12.73□□□□□ -0.37
RNF40-211ENST00000567365 ZNF135P52742 658 aaPredicted RBP12.73□□□□□ -0.37
RNF40-211ENST00000567365 GNA12Q03113 381 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 DPYSQ14117 519 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 HNRNPA1L2Q32P51 320 aaKnown RBP12.73□□□□□ -0.37
RNF40-211ENST00000567365 KCNT1Q5JUK3 1230 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 C6orf118Q5T5N4 469 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 RNF219Q5W0B1 726 aaPredicted RBP12.73□□□□□ -0.37
RNF40-211ENST00000567365 SERPINA13PQ6UXR4 307 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 CCDC117Q8IWD4 279 aaPredicted RBP12.73□□□□□ -0.37
RNF40-211ENST00000567365 RHOT2Q8IXI1 618 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 UMODL1-AS1Q8N2C9 162 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 DCAF4L2Q8NA75 395 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 TSTD1Q8NFU3 115 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 OR7D4Q8NG98 312 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 FRS2Q8WU20 508 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 MRGPRX1Q96LB2 322 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 MKRN2Q9H000 416 aaKnown RBP12.73□□□□□ -0.37
RNF40-211ENST00000567365 DHX35Q9H5Z1 703 aaKnown RBP12.73□□□□□ -0.37
RNF40-211ENST00000567365 LCMT1Q9UIC8 334 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 VPS51Q9UID3 782 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 SLCO3A1Q9UIG8 710 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 SALL4Q9UJQ4 1053 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 TFR2Q9UP52 801 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 HS3ST2Q9Y278 367 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 R4GN57 208 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 GVINP1Q7Z2Y8 2422 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 LAMA1P25391 3075 aa12.73□□□□□ -0.37
RNF40-211ENST00000567365 EP300Q09472 2414 aaPredicted RBP12.72□□□□□ -0.37
RNF40-211ENST00000567365 CXorf51AA0A1B0GTR3 108 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 TCRBV21S2A2A0A5A6 115 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 AXIN1O15169 862 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 FGF10O15520 208 aaPredicted RBP12.72□□□□□ -0.37
RNF40-211ENST00000567365 PJA2O43164 708 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 CREB3O43889 395 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 SNAP91O60641 907 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 MOCS3O95396 460 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 MT-CO1P00395 513 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 GOT1P17174 413 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 NDUFV2P19404 249 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 GLDCP23378 1020 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 EPHB2P29323 1055 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 CNR2P34972 360 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 ARHGAP25P42331 645 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 GSDMDP57764 484 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 ARF5P84085 180 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 MAP7D1Q3KQU3 841 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 AFMIDQ63HM1 303 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 HEATR6Q6AI08 1181 aaKnown RBP12.72□□□□□ -0.37
RNF40-211ENST00000567365 SDE2Q6IQ49 451 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 ANO7Q6IWH7 933 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 RWDD4Q6NW29 188 aaKnown RBP12.72□□□□□ -0.37
RNF40-211ENST00000567365 POLNQ7Z5Q5 900 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
RNF40-211ENST00000567365 SUMF1Q8NBK3 374 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 ARHGEF2Q92974 986 aaKnown RBP12.72□□□□□ -0.37
RNF40-211ENST00000567365 PPP1R9BQ96SB3 815 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 LRRC19Q9H756 370 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 PCDH18Q9HCL0 1135 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 POLMQ9NP87 494 aaPredicted RBP12.72□□□□□ -0.37
RNF40-211ENST00000567365 PRSS16Q9NQE7 514 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 CWC15Q9P013 229 aaKnown RBP12.72□□□□□ -0.37
RNF40-211ENST00000567365 VPS28Q9UK41 221 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 PLA2G4CQ9UP65 541 aa12.72□□□□□ -0.37
RNF40-211ENST00000567365 TARSL2A2RTX5 802 aaKnown RBP12.71□□□□□ -0.37
RNF40-211ENST00000567365 BTNL10A8MVZ5 291 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 TTC34A8MYJ7 566 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 EEF2KO00418 725 aaKnown RBP12.71□□□□□ -0.37
RNF40-211ENST00000567365 ZNF821O75541 412 aaPredicted RBP12.71□□□□□ -0.37
RNF40-211ENST00000567365 SRCP12931 536 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 ACVRL1P37023 503 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 NUMBP49757 651 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 YBEYP58557 167 aaPredicted RBP12.71□□□□□ -0.37
RNF40-211ENST00000567365 TPI1P60174 286 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 SRSF5Q13243 272 aaKnown RBP12.71□□□□□ -0.37
RNF40-211ENST00000567365 SPA17Q15506 151 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 SMTNL2Q2TAL5 461 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 ATP13A4Q4VNC1 1196 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.37
RNF40-211ENST00000567365 C9orf64Q5T6V5 341 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 RFX8Q6ZV50 586 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 ARHGAP12Q8IWW6 846 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 SH2D3CQ8N5H7 860 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 ZNF366Q8N895 744 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 ACRBPQ8NEB7 543 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms