RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 SFXN1Q9H9B4 322 aa11.52□□□□□ -0.57
SNX29-204ENST00000564791 KLHL8Q9P2G9 620 aaPredicted RBP11.52□□□□□ -0.57
SNX29-204ENST00000564791 IPO11Q9UI26 975 aaKnown RBP11.52□□□□□ -0.57
SNX29-204ENST00000564791 CCL26Q9Y258 94 aa11.52□□□□□ -0.57
SNX29-204ENST00000564791 A0A1B0GVM2 712 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 TCAF2A6NFQ2 919 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 ARHGAP42A6NI28 874 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 GFRA2O00451 464 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 ZNF197O14709 1029 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 CHADO15335 359 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 RAMP2O60895 175 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 CLDN11O75508 207 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 PAPLNO95428 1278 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 PRAMEF12O95522 483 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 GLP2RO95838 553 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 JCHAINP01591 159 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 PSMB4P28070 264 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 FDFT1P37268 417 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 MAGEA6P43360 314 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 PMS2P54278 862 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 IFI35P80217 286 aaPredicted RBP11.51□□□□□ -0.57
SNX29-204ENST00000564791 SLMAPQ14BN4 828 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 POLD3Q15054 466 aaPredicted RBP11.51□□□□□ -0.57
SNX29-204ENST00000564791 PARP15Q460N3 678 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 UBAP2Q5T6F2 1119 aaKnown RBP11.51□□□□□ -0.57
SNX29-204ENST00000564791 POTEHQ6S545 545 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 CHST9Q7L1S5 443 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 LRRC49Q8IUZ0 686 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 BBS7Q8IWZ6 715 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 RIN3Q8TB24 985 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 ITFG1Q8TB96 612 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 ZSCAN18Q8TBC5 510 aaPredicted RBP11.51□□□□□ -0.57
SNX29-204ENST00000564791 USP33Q8TEY7 942 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 UBLCP1Q8WVY7 318 aaPredicted RBP11.51□□□□□ -0.57
SNX29-204ENST00000564791 USP13Q92995 863 aaPredicted RBP11.51□□□□□ -0.57
SNX29-204ENST00000564791 PPP2R3CQ969Q6 453 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 ZBTB9Q96C00 473 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 TSPYL1Q9H0U9 437 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 RETREG1Q9H6L5 497 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 VIPAS39Q9H9C1 493 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 DZANK1Q9NVP4 752 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 ZNF510Q9Y2H8 683 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 CDH23Q9H251 3354 aa11.51□□□□□ -0.57
SNX29-204ENST00000564791 MYOFQ9NZM1 2061 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 SOBPA7XYQ1 873 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 SMAPO00193 183 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 MATN3O15232 486 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 ZBTB24O43167 697 aaPredicted RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 TBL1XO60907 577 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 ACVRL1P37023 503 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 HYAL1Q12794 435 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 SEMA5AQ13591 1074 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 TEX44Q53QW1 395 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 TCEAL5Q5H9L2 206 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 RARS2Q5T160 578 aaKnown RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 TTC39BQ5VTQ0 682 aaPredicted RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 TIGD7Q6NT04 549 aaPredicted RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 PID1Q7Z2X4 250 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 ZNF354CQ86Y25 554 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 HJURPQ8NCD3 748 aaPredicted RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 OR52K2Q8NGK3 314 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 EXOC4Q96A65 974 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 ZNF419Q96HQ0 510 aaPredicted RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 ZSWIM3Q96MP5 696 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 AGAP3Q96P47 875 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 RBM15Q96T37 977 aaKnown RBP eCLIP11.5□□□□□ -0.57
SNX29-204ENST00000564791 EPB41L4BQ9H329 900 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 PRO3102Q9H379 93 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 CDC42EP4Q9H3Q1 356 aaKnown RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 NSUN3Q9H649 340 aaKnown RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 SP110Q9HB58 689 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 SAYSD1Q9NPB0 183 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 TDP1Q9NUW8 608 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 IGSF9Q9P2J2 1179 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 RSPH14Q9UHP6 348 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 TRHDEQ9UKU6 1024 aa11.5□□□□□ -0.57
SNX29-204ENST00000564791 MRPS23Q9Y3D9 190 aaKnown RBP11.5□□□□□ -0.57
SNX29-204ENST00000564791 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.49□□□□□ -0.57
SNX29-204ENST00000564791 E2F8A0AVK6 867 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 J3KR12 359 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 LINC01565O15544 149 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 BANF1O75531 89 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 PEX11BO96011 259 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 APRTP07741 180 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 RHOCP08134 193 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 CCNB1P14635 433 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 NFKB1P19838 968 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 TPSB2P20231 275 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 CD68P34810 354 aaPredicted RBP11.49□□□□□ -0.57
SNX29-204ENST00000564791 ARL4CP56559 192 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 YBEYP58557 167 aaPredicted RBP11.49□□□□□ -0.57
SNX29-204ENST00000564791 GNA12Q03113 381 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 USP4Q13107 963 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 ZNF177Q13360 481 aaPredicted RBP11.49□□□□□ -0.57
SNX29-204ENST00000564791 SERINC3Q13530 473 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 TPSAB1Q15661 275 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 HIF1AQ16665 826 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 PARP6Q2NL67 630 aa11.49□□□□□ -0.57
SNX29-204ENST00000564791 FNBP1LQ5T0N5 605 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms