RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ATP13A1Q9HD20 1204 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 POLR3BQ9NW08 1133 aaPredicted RBP16.39■□□□□ 0.21
RAB40C-208ENST00000564703 C2orf42Q9NWW7 574 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 ZSCAN32Q9NX65 697 aa16.39■□□□□ 0.21
RAB40C-208ENST00000564703 TCRBV21S2A2A0A5A6 115 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 K7ESF4 209 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 CBX4O00257 560 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 ARHGAP6O43182 974 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 SPOPO43791 374 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 RAMP2O60895 175 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 NUMBP49757 651 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 HADHBP55084 474 aaKnown RBP16.38■□□□□ 0.21
RAB40C-208ENST00000564703 CDH6P55285 790 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 YBEYP58557 167 aaPredicted RBP16.38■□□□□ 0.21
RAB40C-208ENST00000564703 SLC20A2Q08357 652 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 TCF15Q12870 199 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 PDK2Q15119 407 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 DPYSL2Q16555 572 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 IFI16Q16666 785 aaKnown RBP16.38■□□□□ 0.21
RAB40C-208ENST00000564703 RFX8Q6ZV50 586 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 NLRP14Q86W24 1093 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 OR52K2Q8NGK3 314 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 ALG14Q96F25 216 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 CWC15Q9P013 229 aaKnown RBP16.38■□□□□ 0.21
RAB40C-208ENST00000564703 TFR2Q9UP52 801 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 ARIH1Q9Y4X5 557 aaPredicted RBP16.38■□□□□ 0.21
RAB40C-208ENST00000564703 OR51B4Q9Y5P0 310 aa16.38■□□□□ 0.21
RAB40C-208ENST00000564703 A0A0D9SEW6 157 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 CCDC163A0A0D9SF12 145 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 BTNL10A8MVZ5 291 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 WASH4PA8MWX3 477 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 AXIN1O15169 862 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 TNNT1P13805 278 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 TCF4P15884 667 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 GOT1P17174 413 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 HOXC13P31276 330 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 CTSOP43234 321 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-208ENST00000564703 PXNP49023 591 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-208ENST00000564703 FNTBP49356 437 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 SLC25A11Q02978 314 aaKnown RBP16.37■□□□□ 0.21
RAB40C-208ENST00000564703 ENPP2Q13822 863 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 PTPRNQ16849 979 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 ANO7Q6IWH7 933 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 CYP4V2Q6ZWL3 525 aaPredicted RBP16.37■□□□□ 0.21
RAB40C-208ENST00000564703 DAAM2Q86T65 1068 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 LONP2Q86WA8 852 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 DCAF4L2Q8NA75 395 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 OR7D4Q8NG98 312 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 HMGB4Q8WW32 186 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 TMEM245Q9H330 911 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 EBF1Q9UH73 591 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 SLCO3A1Q9UIG8 710 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.37■□□□□ 0.21
RAB40C-208ENST00000564703 PCDHGA2Q9Y5H1 932 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 RAD54BQ9Y620 910 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 ALG6Q9Y672 507 aa16.37■□□□□ 0.21
RAB40C-208ENST00000564703 A0A1W2PQF6 199 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 PJA2O43164 708 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 BUB1O43683 1085 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 BUB1BO60566 1050 aaPredicted RBP16.36■□□□□ 0.21
RAB40C-208ENST00000564703 CHRM1P11229 460 aaPredicted RBP16.36■□□□□ 0.21
RAB40C-208ENST00000564703 HLA-EP13747 358 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 ERCC2P18074 760 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 COMTP21964 271 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 PRKCHP24723 683 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 CNR2P34972 360 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 NDST2P52849 883 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 GEMIN4P57678 1058 aaKnown RBP16.36■□□□□ 0.21
RAB40C-208ENST00000564703 BYSLQ13895 437 aaKnown RBP16.36■□□□□ 0.21
RAB40C-208ENST00000564703 ATP13A4Q4VNC1 1196 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 USP39Q53GS9 565 aaKnown RBP16.36■□□□□ 0.21
RAB40C-208ENST00000564703 TXNRD3NBQ6F5E7 133 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 POLNQ7Z5Q5 900 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 WDR5BQ86VZ2 330 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 RHOT1Q8IXI2 618 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 UMODL1-AS1Q8N2C9 162 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 LZTR1Q8N653 840 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 ATP11CQ8NB49 1132 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 ARHGEF2Q92974 986 aaKnown RBP16.36■□□□□ 0.21
RAB40C-208ENST00000564703 ERLEC1Q96DZ1 483 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 DESI2Q9BSY9 194 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 CALN1Q9BXU9 219 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 PCDH18Q9HCL0 1135 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 RCOR3Q9P2K3 495 aaPredicted RBP16.36■□□□□ 0.21
RAB40C-208ENST00000564703 ZNF212Q9UDV6 495 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 VPS51Q9UID3 782 aa16.36■□□□□ 0.21
RAB40C-208ENST00000564703 REXO2Q9Y3B8 237 aaKnown RBP16.36■□□□□ 0.21
RAB40C-208ENST00000564703 FARP1Q9Y4F1 1045 aaPredicted RBP16.36■□□□□ 0.21
RAB40C-208ENST00000564703 EDDM13A0A1B0GTR0 161 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 TARSL2A2RTX5 802 aaKnown RBP16.35■□□□□ 0.21
RAB40C-208ENST00000564703 ARHGAP42A6NI28 874 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 SNAP91O60641 907 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 RNASEH1O60930 286 aaKnown RBP16.35■□□□□ 0.21
RAB40C-208ENST00000564703 AMPD1P23109 780 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 VASPP50552 380 aaPredicted RBP16.35■□□□□ 0.21
RAB40C-208ENST00000564703 TAS2R40P59535 323 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 PARP15Q460N3 678 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 ARTNQ5T4W7 220 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 LRRC38Q5VT99 294 aa16.35■□□□□ 0.21
RAB40C-208ENST00000564703 KIAA1211LQ6NV74 962 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms