RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 FAM47DPA6NHR8 397 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 MCF2LO15068 1137 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 TNFSF14O43557 240 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 PAGE1O75459 146 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 GRAP2O75791 330 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 DKK1O94907 266 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 IL1BP01584 269 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 CDK4P11802 303 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 CYP11B1P15538 503 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 OVGP1Q12889 678 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 SLC25A52Q3SY17 297 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 PTPN20Q4JDL3 420 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 LRRC31Q6UY01 552 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 CCNI2Q6ZMN8 369 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 CLEC17AQ6ZS10 378 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 SETD3Q86TU7 594 aaPredicted RBP12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 PRPF39Q86UA1 669 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 ERICH1Q86X53 443 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 ZNF677Q86XU0 584 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 AADATQ8N5Z0 425 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 OR14C36Q8NHC7 312 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 OR8D1Q8WZ84 308 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 NAA15Q9BXJ9 866 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 STK33Q9BYT3 514 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 RETREG1Q9H6L5 497 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 ERVMER34-1Q9H9K5 563 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 COX16Q9P0S2 106 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 VANGL2Q9ULK5 521 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 OR51B4Q9Y5P0 310 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 IGF2RP11717 2491 aa12.53□□□□□ -0.4
GTF3C1-204ENST00000564664 TBC1D3DA0A087WVF3 549 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TBC1D3IA0A087WXS9 549 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TBC1D3EA0A087X179 549 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TBC1D3KA0A087X1G2 549 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 A0A1B0GTQ1 180 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TBC1D3FA6NER0 549 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 DRGXA6NNA5 263 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TBC1D3LB9A6J9 549 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 C1QTNF3-AMACRE9PGA6 284 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 H0Y8X5 98 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 LATO43561 262 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 MAGEC1O60732 1142 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TBC1D3HP0C7X1 549 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 UCHL3P15374 230 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 CD38P28907 300 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 PSMD8P48556 350 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 ADPRHP54922 357 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 KCNMA1Q12791 1236 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 RAPGEF1Q13905 1077 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 KCNJ12Q14500 433 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 DLG2Q15700 870 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 DPCR1Q3MIW9 517 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 ACCSLQ4AC99 568 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TCP11X2Q5H9J9 407 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TBC1D3GQ6DHY5 549 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TBC1D3CQ6IPX1 549 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 ZNF783Q6ZMS7 281 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TMPRSS7Q7RTY8 843 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 SLCO6A1Q86UG4 719 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 IQCHQ86VS3 1027 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TBC1D3Q8IZP1 549 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 GALNT15Q8N3T1 639 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 OXR1Q8N573 874 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 SH2D3CQ8N5H7 860 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 ENOX1Q8TC92 643 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 CCDC114Q96M63 670 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 HAPLN3Q96S86 360 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 ELF4Q99607 663 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 C2orf49Q9BVC5 232 aaPredicted RBP12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 TKTL2Q9H0I9 626 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 SIK2Q9H0K1 926 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 PLCB1Q9NQ66 1216 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 SERGEFQ9UGK8 458 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 VPS28Q9UK41 221 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 PPM1HQ9ULR3 514 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 DMTF1Q9Y222 760 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 HS3ST2Q9Y278 367 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 SLCO1B1Q9Y6L6 691 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 KNTC1P50748 2209 aa12.52□□□□□ -0.41
GTF3C1-204ENST00000564664 CXorf51AA0A1B0GTR3 108 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 A0A1W2PR77 199 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 SRRM3A6NNA2 597 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 RNGTTO60942 597 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 ADCY5O95622 1261 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 TPM2P07951 284 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 C1SP09871 688 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 ZNF18P17022 549 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 RXRGP48443 463 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 ARRB1P49407 418 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 STK19P49842 368 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 CLCN6P51797 869 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 DEUP1Q05D60 604 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 SLC20A2Q08357 652 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 C6orf118Q5T5N4 469 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 NEK5Q6P3R8 708 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 TRIM69Q86WT6 500 aa12.51□□□□□ -0.41
GTF3C1-204ENST00000564664 MFSD2AQ8NA29 543 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms