RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 ALKBH5Q6P6C2 394 aaKnown RBP5.8□□□□□ -1.48
CHD9-210ENST00000564582 C1orf228Q6PIY5 440 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 FAM111BQ6SJ93 734 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 NCCRP1Q6ZVX7 275 aaPredicted RBP5.8□□□□□ -1.48
CHD9-210ENST00000564582 EPM2AIP1Q7L775 607 aaPredicted RBP5.8□□□□□ -1.48
CHD9-210ENST00000564582 ATG9AQ7Z3C6 839 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 SFR1Q86XK3 245 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 CCDC105Q8IYK2 499 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 ZBED8Q8IZ13 594 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 SPICE1Q8N0Z3 855 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 TTC5Q8N0Z6 440 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 D2HGDHQ8N465 521 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 METTL13Q8N6R0 699 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 CNTD1Q8N815 330 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 ENAHQ8N8S7 591 aaPredicted RBP5.8□□□□□ -1.48
CHD9-210ENST00000564582 PIK3C3Q8NEB9 887 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 RFFLQ8WZ73 363 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 EDAQ92838 391 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 ART4Q93070 314 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 CEP95Q96GE4 821 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 TMEM176AQ96HP8 235 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 CDK5RAP3Q96JB5 506 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 FAM81BQ96LP2 452 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 FNBP1Q96RU3 617 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 ADOQ96SZ5 270 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 HNRNPABQ99729 332 aaKnown RBP5.8□□□□□ -1.48
CHD9-210ENST00000564582 MYD88Q99836 296 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.8□□□□□ -1.48
CHD9-210ENST00000564582 MAK16Q9BXY0 300 aaKnown RBP5.8□□□□□ -1.48
CHD9-210ENST00000564582 MRPS26Q9BYN8 205 aaKnown RBP5.8□□□□□ -1.48
CHD9-210ENST00000564582 TRIM9Q9C026 710 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 UNKQ9C0B0 810 aaKnown RBP5.8□□□□□ -1.48
CHD9-210ENST00000564582 BRINP2Q9C0B6 783 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 NT5C3AQ9H0P0 336 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 VPS11Q9H270 941 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 AZI2Q9H6S1 392 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 PLGRKTQ9HBL7 147 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 PREBQ9HCU5 417 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 KCNK9Q9NPC2 374 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 PCDH12Q9NPG4 1184 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 MRGBPQ9NV56 204 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 DNAJC28Q9NX36 388 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 UBAP1Q9NZ09 502 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 ANKFY1Q9P2R3 1169 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 TUBGCP4Q9UGJ1 667 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 AMACRQ9UHK6 382 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 SATB2Q9UPW6 733 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 R3HDM2Q9Y2K5 976 aaKnown RBP5.8□□□□□ -1.48
CHD9-210ENST00000564582 MYH7BA7E2Y1 1941 aa5.8□□□□□ -1.48
CHD9-210ENST00000564582 DDX60Q8IY21 1712 aaKnown RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 TOPAZ1Q8N9V7 1692 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 RIMBP3CA6NJZ7 1639 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 RIMBP3BA6NNM3 1639 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 RIMBP3Q9UFD9 1639 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 RASA4BC9J798 803 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 E9PBE3 544 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 H0YJX3 145 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 CAPN9O14815 690 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 KIAA0391O15091 583 aaKnown RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 RASA4O43374 803 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 THAP12O43422 761 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 BUB1O43683 1085 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 PRAMEF4O60810 478 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 IDH1O75874 414 aaKnown RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 BAIAP3O94812 1187 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 TNFAIP8O95379 198 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 TTC4O95801 387 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 CFBP00751 764 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 FGGP02679 453 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 KRT18P05783 430 aaKnown RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 SCG2P13521 617 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 GYPEP15421 78 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 ZNF24P17028 368 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 ACO1P21399 889 aaKnown RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 ACAT1P24752 427 aaKnown RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 PHBP35232 272 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 PPARGP37231 505 aaPredicted RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 MLH1P40692 756 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 BUD31P41223 144 aaPredicted RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 NR1H2P55055 460 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 PLTPP55058 493 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 HAND2P61296 217 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 ERVK-21P61565 698 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 ADAM8P78325 824 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 DUSP2Q05923 314 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 GFPT1Q06210 699 aaPredicted RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 TRPC3Q13507 836 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 KYNUQ16719 465 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 PTPN21Q16825 1174 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 PFKFB3Q16875 520 aaPredicted RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 ANO4Q32M45 955 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 RNF220Q5VTB9 566 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 C11orf63Q6NUN7 778 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 ZNF790Q6PG37 636 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 PACS1Q6VY07 963 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 KYAT3Q6YP21 454 aaKnown RBP5.79□□□□□ -1.48
CHD9-210ENST00000564582 ANO5Q75V66 913 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 NT5DC3Q86UY8 548 aa5.79□□□□□ -1.48
CHD9-210ENST00000564582 EXOC3L1Q86VI1 746 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms