RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 TTLL2Q9BWV7 592 aa10.03□□□□□ -0.8
UBFD1-203ENST00000564106 TRIM31Q9BZY9 425 aa10.03□□□□□ -0.8
UBFD1-203ENST00000564106 LMAN1LQ9HAT1 526 aa10.03□□□□□ -0.8
UBFD1-203ENST00000564106 FBRSL1Q9HCM7 1045 aaKnown RBP10.03□□□□□ -0.8
UBFD1-203ENST00000564106 MED4Q9NPJ6 270 aa10.03□□□□□ -0.8
UBFD1-203ENST00000564106 COX16Q9P0S2 106 aa10.03□□□□□ -0.8
UBFD1-203ENST00000564106 TLR6Q9Y2C9 796 aa10.03□□□□□ -0.8
UBFD1-203ENST00000564106 SDK1Q7Z5N4 2213 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 SPECC1L-ADORA2AF8WAN1 911 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 K7ESF4 209 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 EEF2KO00418 725 aaKnown RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 PPP1R12AO14974 1030 aaPredicted RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 LAMTOR5O43504 91 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 STK10O94804 968 aaKnown RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 APOEP02649 317 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 TGM1P22735 817 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 IL4RP24394 825 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 CTHP32929 405 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 HSPA9P38646 679 aaKnown RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 RPL21P46778 160 aaKnown RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 PLTPP55058 493 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 TPI1P60174 286 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 MMRN1Q13201 1228 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 PON2Q15165 354 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 LPAL2Q16609 132 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 CA9Q16790 459 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 RFX8Q6ZV50 586 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 TAC4Q86UU9 113 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 GSPT2Q8IYD1 628 aaKnown RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 PLD5Q8N7P1 536 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 MAB21L3Q8N8X9 362 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 LEMD2Q8NC56 503 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 PCDH19Q8TAB3 1148 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 IRF7Q92985 503 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 TRMT2BQ96GJ1 504 aaKnown RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 KCTD15Q96SI1 283 aaPredicted RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 CYP2S1Q96SQ9 504 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 PHACTR1Q9C0D0 580 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 BRD8Q9H0E9 1235 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 TKTL2Q9H0I9 626 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 OSBPL2Q9H1P3 480 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 TASP1Q9H6P5 420 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 PARD6AQ9NPB6 346 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 TRPV5Q9NQA5 729 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 ZDHHC18Q9NUE0 388 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 GPATCH2LQ9NWQ4 482 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 ARHGEF38Q9NXL2 777 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 GRHL1Q9NZI5 618 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 OGFRQ9NZT2 677 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 CWC15Q9P013 229 aaKnown RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 UXTQ9UBK9 157 aaPredicted RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 SLC12A6Q9UHW9 1150 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 MAGED2Q9UNF1 606 aaPredicted RBP10.02□□□□□ -0.81
UBFD1-203ENST00000564106 SHOC2Q9UQ13 582 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 SNX24Q9Y343 169 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 ASB3Q9Y575 518 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 MYOFQ9NZM1 2061 aa10.02□□□□□ -0.81
UBFD1-203ENST00000564106 A0A1W2PQH9 124 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 BCLAF3A2AJT9 711 aaKnown RBP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 C2orf78A6NCI8 922 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 GOLGA6BA6NDN3 693 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 H7C0C1 242 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 SCAMP3O14828 347 aaKnown RBP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 CHADO15335 359 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 FGF10O15520 208 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 MTSS1O43312 755 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 CREB3O43889 395 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 IFNB1P01574 187 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 GOT1P17174 413 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 MX2P20592 715 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 ECHS1P30084 290 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 ATP5OP48047 213 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 ATXN1P54253 815 aaKnown RBP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 PITX1P78337 314 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 NRG1Q02297 640 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 RING1Q06587 406 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 MESP2Q0VG99 397 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 SEMA3BQ13214 749 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 EIF4EBP2Q13542 120 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 MORF4L2Q15014 288 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 PAFAH1B3Q15102 231 aaKnown RBP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 PDK1Q15118 436 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 TAF12Q16514 161 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 P3H1Q32P28 736 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 RAB6CQ53S08 254 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 SLC45A4Q5BKX6 768 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 FSTL4Q6MZW2 842 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 DARS2Q6PI48 645 aaKnown RBP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 TMC3Q7Z5M5 1100 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 CROCCP2Q86T23 111 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 ITIH5Q86UX2 942 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 HOOK3Q86VS8 718 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 DDX42Q86XP3 938 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBFD1-203ENST00000564106 CMTM8Q8IZV2 173 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 KRT222Q8N1A0 295 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 LZTR1Q8N653 840 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 PQLC3Q8N755 202 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 FBXO25Q8TCJ0 367 aa10.01□□□□□ -0.81
UBFD1-203ENST00000564106 RTP4Q96DX8 246 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms