RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 LIMK1P53667 647 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 RPL7AP62424 266 aaKnown RBP31.57■■■□□ 2.64
CMTM4-204ENST00000563952 ACCSLQ4AC99 568 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 PEAR1Q5VY43 1037 aaPredicted RBP31.57■■■□□ 2.64
CMTM4-204ENST00000563952 IL31Q6EBC2 164 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 PPP1R2P3Q6NXS1 205 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 DCUN1D2Q6PH85 259 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 LRSAM1Q6UWE0 723 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 SETD3Q86TU7 594 aaPredicted RBP31.57■■■□□ 2.64
CMTM4-204ENST00000563952 CCDC185Q8N715 623 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 GANCQ8TET4 914 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 ZYG11BQ9C0D3 744 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 IFNKQ9P0W0 207 aa31.57■■■□□ 2.64
CMTM4-204ENST00000563952 CCP110O43303 1012 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 VAV1P15498 845 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 MAOBP27338 520 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 PBX1P40424 430 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 ZNF143P52747 638 aaPredicted RBP31.56■■■□□ 2.64
CMTM4-204ENST00000563952 DUOXA1Q1HG43 343 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 WDR45BQ5MNZ6 344 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 ARTNQ5T4W7 220 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 C6orf118Q5T5N4 469 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 DNAAF5Q86Y56 855 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 MMAAQ8IVH4 418 aaKnown RBP31.56■■■□□ 2.64
CMTM4-204ENST00000563952 STK40Q8N2I9 435 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 CADM4Q8NFZ8 388 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 PTPRN2Q92932 1015 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 PABPC3Q9H361 631 aaKnown RBP31.56■■■□□ 2.64
CMTM4-204ENST00000563952 OR12D3Q9UGF7 316 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 DOCK4Q8N1I0 1966 aa31.56■■■□□ 2.64
CMTM4-204ENST00000563952 C7P10643 843 aa31.55■■■□□ 2.64
CMTM4-204ENST00000563952 ACSL1P33121 698 aa31.55■■■□□ 2.64
CMTM4-204ENST00000563952 PPP1R15BQ5SWA1 713 aa31.55■■■□□ 2.64
CMTM4-204ENST00000563952 CEP76Q8TAP6 659 aa31.55■■■□□ 2.64
CMTM4-204ENST00000563952 VCPIP1Q96JH7 1222 aa31.55■■■□□ 2.64
CMTM4-204ENST00000563952 A0A0D9SEW6 157 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 ATMINO43313 823 aaPredicted RBP31.54■■■□□ 2.64
CMTM4-204ENST00000563952 SNAP91O60641 907 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 PSMD8P48556 350 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 KRT83P78385 493 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 CST6Q15828 149 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 DCAF12L1Q5VU92 463 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 RWDD4Q6NW29 188 aaKnown RBP31.54■■■□□ 2.64
CMTM4-204ENST00000563952 SCYL2Q6P3W7 929 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 SLC23A3Q6PIS1 610 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 RABEPKQ7Z6M1 372 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 DRC7Q8IY82 874 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 CPLX3Q8WVH0 158 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 FAM129BQ96TA1 746 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 PSMB7Q99436 277 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 C2orf49Q9BVC5 232 aaPredicted RBP31.54■■■□□ 2.64
CMTM4-204ENST00000563952 MAGEB5Q9BZ81 275 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 BTBD1Q9H0C5 482 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 FSCN3Q9NQT6 498 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 PPARGC1AQ9UBK2 798 aaKnown RBP31.54■■■□□ 2.64
CMTM4-204ENST00000563952 NCKAP1Q9Y2A7 1128 aa31.54■■■□□ 2.64
CMTM4-204ENST00000563952 A0A1W2PQJ5 194 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 C4orf47A7E2U8 309 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 DDX3XO00571 662 aaKnown RBP eCLIP31.53■■■□□ 2.647e-22■■■■■ 46.8
CMTM4-204ENST00000563952 MID1O15344 667 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 FRS2Q8WU20 508 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 MIR1-1HGQ9H1L0 117 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 OSBPL2Q9H1P3 480 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 FBXL12Q9NXK8 326 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 VPS51Q9UID3 782 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 SCML1Q9UN30 329 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 SLC6A14Q9UN76 642 aa31.53■■■□□ 2.64
CMTM4-204ENST00000563952 PI4KAP42356 2102 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 METTL12A8MUP2 240 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 FAM72CH0Y354 149 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 FTLP02792 175 aaPredicted RBP31.52■■■□□ 2.64
CMTM4-204ENST00000563952 PLEKP08567 350 aaPredicted RBP31.52■■■□□ 2.64
CMTM4-204ENST00000563952 SLC8A1P32418 973 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 MAMLD1Q13495 774 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 ELAVL3Q14576 367 aaKnown RBP31.52■■■□□ 2.64
CMTM4-204ENST00000563952 DLG2Q15700 870 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 TDRD12Q587J7 1177 aaKnown RBP31.52■■■□□ 2.64
CMTM4-204ENST00000563952 FAM72AQ5TYM5 149 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 FAM72DQ6L9T8 149 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 SLFN11Q7Z7L1 901 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 FAM72BQ86X60 149 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 OR7D4Q8NG98 312 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 SNX19Q92543 992 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 NTAN1Q96AB6 310 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 CNPY3Q9BT09 278 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 SPON2Q9BUD6 331 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 C6orf106Q9H6K1 298 aaPredicted RBP31.52■■■□□ 2.64
CMTM4-204ENST00000563952 TMEM9BQ9NQ34 198 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 PARVAQ9NVD7 372 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 ZNF212Q9UDV6 495 aa31.52■■■□□ 2.64
CMTM4-204ENST00000563952 NUMA1Q14980 2115 aa31.51■■■□□ 2.64
CMTM4-204ENST00000563952 ATP9BO43861 1147 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 SEMA4FO95754 770 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 SERPINF2P08697 491 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 GNSP15586 552 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 DESP17661 470 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 ENGP17813 658 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 MAPK8P45983 427 aa31.51■■■□□ 2.63
CMTM4-204ENST00000563952 VASPP50552 380 aaPredicted RBP31.51■■■□□ 2.63
CMTM4-204ENST00000563952 OGDHQ02218 1023 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms