RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 CCDC17Q96LX7 622 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 DOK1Q99704 481 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 TXNDC16Q9P2K2 825 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 PCDHA11Q9Y5I1 949 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 DGKBQ9Y6T7 804 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 E7ENX8 843 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 PSMD11O00231 422 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 EEF1B2P24534 225 aaKnown RBP12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 IDUAP35475 653 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 PSME3P61289 254 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 OXA1LQ15070 435 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 LAYNQ6UX15 382 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 B3GNT9Q6UX72 402 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 CAPSLQ8WWF8 208 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 ALPK1Q96QP1 1244 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 ARPC5LQ9BPX5 153 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 ADI1Q9BV57 179 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 ILKAPQ9H0C8 392 aaPredicted RBP12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 RSAD1Q9HA92 442 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 NYAP2Q9P242 653 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 USP18Q9UMW8 372 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 AURKCQ9UQB9 309 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 ATP11BQ9Y2G3 1177 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 SLC30A1Q9Y6M5 507 aa12.59□□□□□ -0.39
SCAMP2-204ENST00000563829 KCNU1A8MYU2 1149 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 GPR25O00155 361 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 METTL18O95568 372 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 ITGBL1O95965 494 aaPredicted RBP12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 ABCG1P45844 678 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 TAP1Q03518 808 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 GALNT2Q10471 571 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 ARL13BQ3SXY8 428 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 SEZ6Q53EL9 994 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 SEL1L3Q68CR1 1132 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 GK5Q6ZS86 529 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 ACMSDQ8TDX5 336 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 MUC3BQ9H195 1237 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 DHX35Q9H5Z1 703 aaKnown RBP12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 PCDH12Q9NPG4 1184 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 TCEAL9Q9UHQ7 104 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 PTBP2Q9UKA9 531 aaKnown RBP12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 ERVK-11Q9UQG0 969 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 CLPXO76031 633 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 LTFP02788 710 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 JUNP05412 331 aaKnown RBP12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 CNTFP26441 200 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 EEF1DP29692 281 aaKnown RBP12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 TTKP33981 857 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 OPRL1P41146 370 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 ADAM17P78536 824 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 CDO1Q16878 200 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 RAB6CQ53S08 254 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 LRRC8EQ6NSJ5 796 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 CES3Q6UWW8 571 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 SCARA5Q6ZMJ2 495 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 MCF2L2Q86YR7 1114 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 CNDP1Q96KN2 507 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 CTRCQ99895 268 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 EFHD1Q9BUP0 239 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 RAB6CQ9H0N0 254 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 SDCBP2Q9H190 292 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 SOX17Q9H6I2 414 aaPredicted RBP12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 IPO11Q9UI26 975 aaKnown RBP12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 TRPC5Q9UL62 973 aaPredicted RBP12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 FZD1Q9UP38 647 aa12.58□□□□□ -0.4
SCAMP2-204ENST00000563829 FOCADQ5VW36 1801 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 FAM155AB1AL88 458 aaPredicted RBP12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 SESN2P58004 480 aaPredicted RBP12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 TSPY1Q01534 308 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 EN1Q05925 392 aaPredicted RBP12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 GRAPQ13588 217 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 PLCL1Q15111 1095 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 PTPN20Q4JDL3 420 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 OR5B17Q8NGF7 314 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 CANT1Q8WVQ1 401 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 TFAP2BQ92481 460 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 CDKL2Q92772 493 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 RIT2Q99578 217 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 CYP26B1Q9NR63 512 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 MOCS1Q9NZB8 636 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 PCDHGC3Q9UN70 934 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 TIMM22Q9Y584 194 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 ZNF541Q9H0D2 1346 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 TCAF2A6NFQ2 919 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 TMEM114B3SHH9 223 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 HDAC3O15379 428 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 CLOCKO15516 846 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 CD19P15391 556 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 HDCP19113 662 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 HPCAL1P37235 193 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 NME5P56597 212 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 MERTKQ12866 999 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 TAZQ16635 292 aa12.57□□□□□ -0.4
SCAMP2-204ENST00000563829 PPP4R4Q6NUP7 873 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms