RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 FAM72DQ6L9T8 149 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 TIGD7Q6NT04 549 aaPredicted RBP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 RWDD4Q6NW29 188 aaKnown RBP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 ARHGEF18Q6ZSZ5 1173 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 CCDC25Q86WR0 208 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 FAM72BQ86X60 149 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 MIB1Q86YT6 1006 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 PDIK1LQ8N165 341 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 CCNYQ8ND76 341 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 EXOC4Q96A65 974 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 AZIN2Q96A70 460 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 GCNAQ96QF7 691 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 RBM15Q96T37 977 aaKnown RBP eCLIP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 DDX50Q9BQ39 737 aaKnown RBP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 TCF25Q9BQ70 676 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 ZYG11BQ9C0D3 744 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 GRIP2Q9C0E4 1043 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 SIK2Q9H0K1 926 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 USP29Q9HBJ7 922 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 TLR9Q9NR96 1032 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 HAUS2Q9NVX0 235 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 TRHDEQ9UKU6 1024 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 PLAAQ9Y263 795 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 NR2E3Q9Y5X4 410 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 HELZP42694 1942 aaKnown RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 SHROOM3Q8TF72 1996 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 A0A0A0MRY4 1105 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 GOLGA6CA6NDK9 693 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 ZNF840PA6NDX5 716 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 WASH4PA8MWX3 477 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 E7EVH7 732 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 I6L893 689 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 TP73O15350 636 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 CXCL14O95715 111 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 LATS1O95835 1130 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 MOCS2O96007 188 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 GLUD1P00367 558 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 IVLP07476 585 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 CNPP09543 421 aaKnown RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 MYZAPP0CAP1 466 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 ZSCAN5DPP0CG00 497 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 GOLGA6DP0CG33 693 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 SRGAP2BP0DMP2 458 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 TSHRP16473 764 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 RHOQP17081 205 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 TPSB2P20231 275 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 CDC25CP30307 473 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 PHBP35232 272 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 GARSP41250 739 aaKnown RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 MAGEA6P43360 314 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 NDST2P52849 883 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 FAM193AP78312 1265 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 AP1B1Q10567 949 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 SLC10A2Q12908 348 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 TPSAB1Q15661 275 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 ANO4Q32M45 955 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 CNPY4Q8N129 248 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 ATPAF2Q8N5M1 289 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 RTL3Q8N8U3 475 aaKnown RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 NAT8LQ8N9F0 302 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 GLIS1Q8NBF1 620 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 CPT1BQ92523 772 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 PRCCQ92733 491 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 SPATA13Q96N96 652 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 ZIM3Q96PE6 472 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 SH3GL2Q99962 352 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 CCDC77Q9BR77 488 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 STMN4Q9H169 189 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 ADAM7Q9H2U9 754 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 CDC42EP4Q9H3Q1 356 aaKnown RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 PRDM12Q9H4Q4 367 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 CCSER2Q9H7U1 834 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 PPCSQ9HAB8 311 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 ANLNQ9NQW6 1124 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 EIF2B3Q9NR50 452 aaKnown RBP9.95□□□□□ -0.82
UBFD1-202ENST00000563366 ETNK2Q9NVF9 386 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 GOLGA6AQ9NYA3 693 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 NUDT5Q9UKK9 219 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 HS3ST4Q9Y661 456 aa9.95□□□□□ -0.82
UBFD1-202ENST00000563366 IGLV3-10A0A075B6K4 115 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 LINC01553A4QN01 128 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 ERI2A8K979 691 aaKnown RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 F5H5T6 163 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 AP3B1O00203 1094 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 RNF103O00237 685 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 RIPK2O43353 540 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 TGM5O43548 720 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 SPAG6O75602 509 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 TTC4O95801 387 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 OAS1P00973 400 aaKnown RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 C8AP07357 584 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 ABHD2P08910 425 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 SYN1P17600 705 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 CCNCP24863 283 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 OAS2P29728 719 aaKnown RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 MAPKAPK2P49137 400 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 PGFP49763 221 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-202ENST00000563366 SEMA5AQ13591 1074 aa9.94□□□□□ -0.82
UBFD1-202ENST00000563366 KCNJ11Q14654 390 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms