RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 OR7D4Q8NG98 312 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 FRS2Q8WU20 508 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 RLN3Q8WXF3 142 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 NKD2Q969F2 451 aaPredicted RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 TBC1D31Q96DN5 1066 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 RPL10LQ96L21 214 aaKnown RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 PANX2Q96RD6 677 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 KCTD15Q96SI1 283 aaPredicted RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 ANP32EQ9BTT0 268 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 SNRNP25Q9BV90 132 aaKnown RBP8.77□□□□□ -1.01
UBR1-204ENST00000563239 KLC2Q9H0B6 622 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 OSGEPQ9NPF4 335 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 TMEM248Q9NWD8 314 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 ANAPC7Q9UJX3 599 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 USP18Q9UMW8 372 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 CFAP54Q96N23 3096 aa8.77□□□□□ -1.01
UBR1-204ENST00000563239 OTOGLQ3ZCN5 2332 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 DMXL1Q9Y485 3027 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 UNC79Q9P2D8 2635 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 WASH4PA8MWX3 477 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 K7ERQ8 282 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 ATP9BO43861 1147 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 CREB3O43889 395 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 PRPSAP2O60256 369 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 SIN3BO75182 1162 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 KRT37O76014 449 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 RNF8O76064 485 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 MTA2O94776 668 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 ALDH1A2O94788 518 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 MOCS3O95396 460 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 CD160O95971 181 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 LMNAP02545 664 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 VAV1P15498 845 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 OR1E1P30953 314 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 ACVRL1P37023 503 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 MAPKAPK2P49137 400 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 GNA12Q03113 381 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 SULT2A1Q06520 285 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 SIM2Q14190 667 aaPredicted RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 TCEAL1Q15170 157 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 E2F5Q15329 346 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 LPAL2Q16609 132 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 C6orf118Q5T5N4 469 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 RWDD4Q6NW29 188 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 ZNF783Q6ZMS7 281 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 METTL3Q86U44 580 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 TMEM139Q8IV31 216 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 FAM160A2Q8N612 972 aaPredicted RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 RTL3Q8N8U3 475 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 OR2T3Q8NH03 318 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 SLC35G2Q8TBE7 412 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 ZNF564Q8TBZ8 553 aaPredicted RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 CTNNBL1Q8WYA6 563 aaPredicted RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 PTPRN2Q92932 1015 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 ARHGEF2Q92974 986 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 ZC3H10Q96K80 434 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 FAM129BQ96TA1 746 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 ACE2Q9BYF1 805 aaPredicted RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 MUC3BQ9H195 1237 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 DUSP15Q9H1R2 295 aaPredicted RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 DEF6Q9H4E7 631 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 DHX35Q9H5Z1 703 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 RETREG1Q9H6L5 497 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 USP36Q9P275 1121 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 BCCIPQ9P287 314 aaKnown RBP eCLIP8.76□□□□□ -1.01
UBR1-204ENST00000563239 CTTNBP2NLQ9P2B4 639 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 UVRAGQ9P2Y5 699 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 IP6K2Q9UHH9 426 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 DNAI1Q9UI46 699 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 VPS51Q9UID3 782 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 VPS28Q9UK41 221 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 TFR2Q9UP52 801 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 AP4E1Q9UPM8 1137 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 SMG5Q9UPR3 1016 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 HS3ST2Q9Y278 367 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 REXO2Q9Y3B8 237 aaKnown RBP8.76□□□□□ -1.01
UBR1-204ENST00000563239 ACTL7AQ9Y615 435 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 SPTBN4Q9H254 2564 aa8.76□□□□□ -1.01
UBR1-204ENST00000563239 IGHV1OR15-9A0A0B4J2B8 117 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 TARSL2A2RTX5 802 aaKnown RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 SOWAHDA6NJG2 315 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 EIF3CLB5ME19 914 aaKnown RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 MYO1FO00160 1098 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 SMAD6O43541 496 aaKnown RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 SYNCRIPO60506 623 aaKnown RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 GFRA3O60609 400 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 ZNF821O75541 412 aaPredicted RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 PROSCO94903 275 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 IGLV3-19P01714 112 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 RARAP10276 462 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 SRCP12931 536 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 GOT1P17174 413 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 TGM1P22735 817 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 IL4RP24394 825 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 EPHB2P29323 1055 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 ARSEP51690 589 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 TAS2R40P59535 323 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 ST8SIA6P61647 398 aa8.75□□□□□ -1.01
UBR1-204ENST00000563239 RPS14P62263 151 aaKnown RBP8.75□□□□□ -1.01
UBR1-204ENST00000563239 ARF5P84085 180 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms