RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PDE11AQ9HCR9 933 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 TXNRD2Q9NNW7 524 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 PI4KBQ9UBF8 816 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 FBXO2Q9UK22 296 aaPredicted RBP3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 DNAJC16Q9Y2G8 782 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 DERAQ9Y315 318 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 SCINQ9Y6U3 715 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 ZNF521Q96K83 1311 aa3.59□□□□□ -1.83
SHCBP1-202ENST00000563219 CYP2D7A0A087X1C5 515 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 A0A1W2PPH5 198 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 A6NCN8 305 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 SAC3D1A6NKF1 404 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 GRM8O00222 908 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 DSCR3O14972 297 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 INPPL1O15357 1258 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 KCNAB3O43448 404 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 BCAR3O75815 825 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 GFPT2O94808 682 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 BMP15O95972 392 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 IGKV2-30P06310 120 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 CNPP09543 421 aaKnown RBP3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ALDOCP09972 364 aaKnown RBP3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ACP5P13686 325 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 AKR1A1P14550 325 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 PRPH2P23942 346 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 PNPLA4P41247 253 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ADPRHP54922 357 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 YPEL5P62699 121 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 SHC2P98077 582 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 B4GALNT1Q00973 533 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 GALNT2Q10471 571 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 MTA1Q13330 715 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ZNF268Q14587 947 aaPredicted RBP3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 DAZAP2Q15038 168 aaPredicted RBP3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ETFDHQ16134 617 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 CTXN3Q4LDR2 81 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ZNF484Q5JVG2 852 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ATG16L1Q676U5 607 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 HAUS3Q68CZ6 603 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ANO7Q6IWH7 933 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 DHRS13Q6UX07 377 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 KIAA1324Q6UXG2 1013 aaKnown RBP3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 RTL10Q7L3V2 364 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 MDGA2Q7Z553 956 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 PDILTQ8N807 584 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 USP38Q8NB14 1042 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 IGFBPL1Q8WX77 278 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ST8SIA4Q92187 359 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 PIGKQ92643 395 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ARRDC3Q96B67 414 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ZNF48Q96MX3 618 aaPredicted RBP3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 SH2D3AQ9BRG2 576 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ABHD14AQ9BUJ0 271 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 PAIP1Q9H074 479 aaKnown RBP3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 OSBPL5Q9H0X9 879 aaPredicted RBP3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 ACAD9Q9H845 621 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 PLEKHA2Q9HB19 425 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 PDGFCQ9NRA1 345 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 MTMR4Q9NYA4 1195 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 HSF4Q9ULV5 492 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 LAS1LQ9Y4W2 734 aaKnown RBP3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 AFG3L2Q9Y4W6 797 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 LMTK3Q96Q04 1460 aa3.58□□□□□ -1.84
SHCBP1-202ENST00000563219 SMIM35A0A1B0GVV1 85 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 MCIDASD6RGH6 385 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 PEX12O00623 359 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 SPTLC2O15270 562 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 RTN3O95197 1032 aaPredicted RBP3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 CD63P08962 238 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 CSF1P09603 554 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 ST6GAL1P15907 406 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 TFEBP19484 476 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 ATP5F1P24539 256 aaPredicted RBP3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 RXRGP48443 463 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 SLC12A2P55011 1212 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 CASP6P55212 293 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 TLE2Q04725 743 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 CHRNDQ07001 517 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 CDK18Q07002 472 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 THOC5Q13769 683 aaKnown RBP3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 SEMA3AQ14563 771 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 GPR162Q16538 588 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 SUPT20HL1Q3ZLR7 823 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 EARS2Q5JPH6 523 aaKnown RBP3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 MAP3K21Q5TCX8 1036 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 ITPRIPL1Q6GPH6 555 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 MIS18BP1Q6P0N0 1132 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 DEF8Q6ZN54 512 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 BBS12Q6ZW61 710 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 FAM47BQ8NA70 645 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 DENND1AQ8TEH3 1009 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 KAT2BQ92831 832 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 ZNF347Q96SE7 839 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 CHCHD6Q9BRQ6 235 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 HERC2P3Q9BVR0 1158 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 AGXT2Q9BYV1 514 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 PRSS22Q9GZN4 317 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 UNC45AQ9H3U1 944 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 NOD2Q9HC29 1040 aa3.57□□□□□ -1.84
SHCBP1-202ENST00000563219 OLA1Q9NTK5 396 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms