RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 RTL10Q7L3V2 364 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 RAB11FIP2Q7L804 512 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 RHPN2Q8IUC4 686 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 TBC1D3Q8IZP1 549 aaPredicted RBP3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 ENAHQ8N8S7 591 aaPredicted RBP3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 ATG16L2Q8NAA4 619 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 HMGB4Q8WW32 186 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 CENPIQ92674 756 aaPredicted RBP3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 PHF21BQ96EK2 531 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 MCRS1Q96EZ8 462 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 TMEM120AQ9BXJ8 343 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 SFXN1Q9H9B4 322 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 LIN7CQ9NUP9 197 aaKnown RBP3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 DACT1Q9NYF0 836 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 TRPC5Q9UL62 973 aaPredicted RBP3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 SLC8A2Q9UPR5 921 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 CNTN6Q9UQ52 1028 aa3.49□□□□□ -1.85
HDGFL3-202ENST00000562702 SLC38A8A6NNN8 435 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 M0QYT0 321 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 ACKR2O00590 384 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 CNTN5O94779 1100 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 ACTL6BO94805 426 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 CYP3A4P08684 503 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 RFPL3SP0C7P2 107 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 IGFBP2P18065 325 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 TGM2P21980 687 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 TCEA1P23193 301 aaKnown RBP3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 HOXA11P31270 313 aaPredicted RBP3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 CDK7P50613 346 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 AP2B1P63010 937 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 GALNT1Q10472 559 aaPredicted RBP3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 BIRC2Q13490 618 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 KRT72Q14CN4 511 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 CCDC38Q502W7 563 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 LRIG3Q6UXM1 1119 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 SLC44A2Q8IWA5 706 aaPredicted RBP3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 LMO3Q8TAP4 145 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 CPT1BQ92523 772 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 PIMREGQ9BSJ6 248 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 BRD8Q9H0E9 1235 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 TASP1Q9H6P5 420 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 MOV10Q9HCE1 1003 aaKnown RBP3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 MLXIPLQ9NP71 852 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 PRDM8Q9NQV8 689 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 THSD1Q9NS62 852 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 RAB21Q9UL25 225 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 SLC12A4Q9UP95 1085 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 COMMD10Q9Y6G5 202 aa3.48□□□□□ -1.85
HDGFL3-202ENST00000562702 A0A1W2PPC1 479 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 DPPA5A6NC42 116 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 FAM90A18PA6NE21 464 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 FAM90A16PA6NEW6 464 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 FAM90A9PA6NNJ1 464 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 FAM90A5PA8MXJ8 464 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 KAT7O95251 611 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 FAM90A15PP0C7V4 464 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 FAM90A14PP0C7W9 464 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 RFX2P48378 723 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 CXCR3P49682 368 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 FOXL2P58012 376 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 FAM3BP58499 235 aaPredicted RBP3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 POU3F1Q03052 451 aaPredicted RBP3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 FOXO1Q12778 655 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 RPS6KA2Q15349 733 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 PDCD2Q16342 344 aaPredicted RBP3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 PRAMEF19Q5SWL8 479 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 LIN54Q6MZP7 749 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 TRILQ7L0X0 811 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 CCDC117Q8IWD4 279 aaPredicted RBP3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 ADGRF3Q8IZF5 1079 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 CACNA2D3Q8IZS8 1091 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 OR52N4Q8NGI2 321 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 RPS6KC1Q96S38 1066 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 MECRQ9BV79 373 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 ELAC1Q9H777 363 aaKnown RBP3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 NDUFAF4Q9P032 175 aa3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 C19orf53Q9UNZ5 99 aaPredicted RBP3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 COPG1Q9Y678 874 aaKnown RBP3.47□□□□□ -1.85
HDGFL3-202ENST00000562702 NACADO15069 1562 aa3.46□□□□□ -1.85
HDGFL3-202ENST00000562702 CYP3A7-CYP3A51PA0A087WV96 503 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 hCG_1642624A0A1W2PR95 340 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 BTBD18B2RXH4 712 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 ATG13O75143 517 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 ALDOCP09972 364 aaKnown RBP3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 GYS1P13807 737 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 CYP3A7P24462 503 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 PCP4P48539 62 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 SHC2P98077 582 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 TRIM14Q14142 442 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 INO80DQ53TQ3 878 aaPredicted RBP3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 NUGGCQ68CJ6 796 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 ISM2Q6H9L7 571 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 TANGO2Q6ICL3 276 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 PAQR4Q8N4S7 273 aaPredicted RBP3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 ARL14EPQ8N8R7 260 aaPredicted RBP3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 OR1N1Q8NGS0 311 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 C3orf49Q96BT1 292 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 CLMNQ96JQ2 1002 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 ZNF347Q96SE7 839 aa3.46□□□□□ -1.86
HDGFL3-202ENST00000562702 MAGEH1Q9H213 219 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms