RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CCDC47Q96A33 483 aaKnown RBP12.05□□□□□ -0.48
NSMCE1-202ENST00000561960 TRIM4Q9C037 500 aa12.05□□□□□ -0.48
NSMCE1-202ENST00000561960 NRSN2Q9GZP1 204 aa12.05□□□□□ -0.48
NSMCE1-202ENST00000561960 ACP6Q9NPH0 428 aa12.05□□□□□ -0.48
NSMCE1-202ENST00000561960 CFAP45Q9UL16 551 aa12.05□□□□□ -0.48
NSMCE1-202ENST00000561960 SCML1Q9UN30 329 aa12.05□□□□□ -0.48
NSMCE1-202ENST00000561960 SNX10Q9Y5X0 201 aa12.05□□□□□ -0.48
NSMCE1-202ENST00000561960 ITIH6Q6UXX5 1313 aa12.05□□□□□ -0.48
NSMCE1-202ENST00000561960 TARSL2A2RTX5 802 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 E9PAM4 449 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 J3QKU1 62 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 CAPN9O14815 690 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 IRAK2O43187 625 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 KLK10O43240 276 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 RNGTTO60942 597 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 CSO75390 466 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 GRAP2O75791 330 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 ENDOD1O94919 500 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 MOCS3O95396 460 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 C1SP09871 688 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 THEGLP0DJG4 465 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 ZNF18P17022 549 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 DGKAP23743 735 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 ACTN2P35609 894 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 ZNF445P59923 1031 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 STAT4Q14765 748 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 NFIL3Q16649 462 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 C3orf38Q5JPI3 329 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 MPP7Q5T2T1 576 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 ANKRD40Q6AI12 368 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 PRPF39Q86UA1 669 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 CCAR2Q8N163 923 aaKnown RBP12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 DCBLD1Q8N8Z6 715 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 OR13H1Q8NG92 308 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 FRS2Q8WU20 508 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 TLR6Q9Y2C9 796 aa12.04□□□□□ -0.48
NSMCE1-202ENST00000561960 TEX51A0A1B0GUA7 166 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 A0A1W2PNU3 283 aaPredicted RBP12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 A0A1W2PQU0 124 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 K7ERQ8 282 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 LATO43561 262 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 PLRG1O43660 514 aaKnown RBP12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 STX10O60499 249 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 CTSLP07711 333 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 SRPRAP08240 638 aaKnown RBP12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 C7P10643 843 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 ACP1P24666 158 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 TAS2R38P59533 333 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 ELAVL3Q14576 367 aaKnown RBP12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 SEL1L3Q68CR1 1132 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 CXorf57Q6NSI4 855 aaKnown RBP12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 HSCBQ8IWL3 235 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 SLC22A18ASQ8N1D0 253 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 TTC39CQ8N584 583 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 FAM181AQ8N9Y4 354 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 MFSD2AQ8NA29 543 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 GRIN3AQ8TCU5 1115 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 KLHDC7BQ96G42 594 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 SLC39A13Q96H72 371 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 SERPINB11Q96P15 392 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 SYNDIG1Q9H7V2 258 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 FAM204AQ9H8W3 233 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 UTP20O75691 2785 aaKnown RBP12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 LRRK1Q38SD2 2015 aa12.03□□□□□ -0.48
NSMCE1-202ENST00000561960 ANKRD36A6QL64 1941 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 DOCK4Q8N1I0 1966 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 CHD5Q8TDI0 1954 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 LY6G6EA0A0G2JKS1 128 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 C10orf142B7Z368 130 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 E5RJQ4 531 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 F5H5T6 163 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 TK2O00142 265 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 KPNA3O00505 521 aaPredicted RBP12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 YKT6O15498 198 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 OPA1O60313 960 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 SNAP91O60641 907 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 MT-CO1P00395 513 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 APOEP02649 317 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 KRT5P13647 590 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 RXRGP48443 463 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 PCBP4P57723 403 aaKnown RBP12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 YWHAEP62258 255 aaKnown RBP12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 NFKB2Q00653 900 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 KCNMA1Q12791 1236 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 MAPK8IP2Q13387 824 aaPredicted RBP12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 DLG2Q15700 870 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 CDKN3Q16667 212 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 EDRF1Q3B7T1 1238 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 LINGO4Q6UY18 593 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 PTAR1Q7Z6K3 402 aaPredicted RBP12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 C14orf80Q86SX3 495 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 PASD1Q8IV76 773 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 CHST14Q8NCH0 376 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 KCNE4Q8WWG9 221 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 OR8D1Q8WZ84 308 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 IRGQQ8WZA9 623 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 RNF34Q969K3 372 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 SLC35C1Q96A29 364 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 ARRDC3Q96B67 414 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 VCPIP1Q96JH7 1222 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms