RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CNGA4Q8IV77 575 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 MMAAQ8IVH4 418 aaKnown RBP10.39□□□□□ -0.75
HERC1-212ENST00000561348 RYBPQ8N488 228 aaPredicted RBP10.39□□□□□ -0.75
HERC1-212ENST00000561348 OR2T3Q8NH03 318 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 CTNNBL1Q8WYA6 563 aaPredicted RBP10.39□□□□□ -0.75
HERC1-212ENST00000561348 SNX19Q92543 992 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 HSPH1Q92598 858 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 CENPIQ92674 756 aaPredicted RBP10.39□□□□□ -0.75
HERC1-212ENST00000561348 TTC17Q96AE7 1141 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 ARHGEF26Q96DR7 871 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 C1orf74Q96LT6 269 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 CHP1Q99653 195 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 EPAS1Q99814 870 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 GPR174Q9BXC1 333 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 ISCUQ9H1K1 167 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 DUSP15Q9H1R2 295 aaPredicted RBP10.39□□□□□ -0.75
HERC1-212ENST00000561348 PRSS16Q9NQE7 514 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 TMEM51Q9NW97 253 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 AP4E1Q9UPM8 1137 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 RALGAPA1Q6GYQ0 2036 aa10.39□□□□□ -0.75
HERC1-212ENST00000561348 DRGXA6NNA5 263 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 MEI4A8MW99 385 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 K7ERQ8 282 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 ZNF217O75362 1048 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 IL1BP01584 269 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 RETP07949 1114 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 SRPRAP08240 638 aaKnown RBP10.38□□□□□ -0.75
HERC1-212ENST00000561348 H2AFZP0C0S5 128 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 TNNT1P13805 278 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 GLDCP23378 1020 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 MIPP30301 263 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 P2RY2P41231 377 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 TPI1P60174 286 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 SMTNL2Q2TAL5 461 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 MAP7D1Q3KQU3 841 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 KCNT1Q5JUK3 1230 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 H2AFVQ71UI9 128 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 CYP2U1Q7Z449 544 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 KIAA0907Q7Z7F0 614 aaPredicted RBP10.38□□□□□ -0.75
HERC1-212ENST00000561348 STK40Q8N2I9 435 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 C12orf50Q8NA57 414 aaPredicted RBP10.38□□□□□ -0.75
HERC1-212ENST00000561348 SPC24Q8NBT2 197 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 NETO2Q8NC67 525 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 RNF25Q96BH1 459 aaPredicted RBP10.38□□□□□ -0.75
HERC1-212ENST00000561348 TOE1Q96GM8 510 aaKnown RBP10.38□□□□□ -0.75
HERC1-212ENST00000561348 LMLNQ96KR4 655 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 MRGPRX3Q96LB0 322 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 DNAJC7Q99615 494 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 OMDQ99983 421 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 C2orf49Q9BVC5 232 aaPredicted RBP10.38□□□□□ -0.75
HERC1-212ENST00000561348 PACSIN1Q9BY11 444 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 MIR1-1HGQ9H1L0 117 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 OSBPL2Q9H1P3 480 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 TNKS2Q9H2K2 1166 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 TMEM245Q9H330 911 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 NHEJ1Q9H9Q4 299 aaPredicted RBP10.38□□□□□ -0.75
HERC1-212ENST00000561348 MBD1Q9UIS9 605 aaPredicted RBP10.38□□□□□ -0.75
HERC1-212ENST00000561348 FZD10Q9ULW2 581 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 HPCAL4Q9UM19 191 aa10.38□□□□□ -0.75
HERC1-212ENST00000561348 RIF1Q5UIP0 2472 aaKnown RBP10.38□□□□□ -0.75
HERC1-212ENST00000561348 EP300Q09472 2414 aaPredicted RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 VPS13AQ96RL7 3174 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 SPAG17Q6Q759 2223 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 IGHV1OR15-9A0A0B4J2B8 117 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 EDDM13A0A1B0GTR0 161 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 MYO1FO00160 1098 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 EEF2KO00418 725 aaKnown RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 RAMP2O60895 175 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 RNASEH2AO75792 299 aaKnown RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 MT-CO1P00395 513 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 CFIP05156 583 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 RHOQP17081 205 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 MAOBP27338 520 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 ACVRL1P37023 503 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 MPLP40238 635 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 PTGER3P43115 390 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 RECQLP46063 649 aaPredicted RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 TPMTP51580 245 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 COPAP53621 1224 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 RPS14P62263 151 aaKnown RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 GNA12Q03113 381 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 ZNF252P-AS1Q0IIN9 211 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 CAMK2GQ13555 558 aaPredicted RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 POLD3Q15054 466 aaPredicted RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 SF3A2Q15428 464 aaKnown RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 DLG2Q15700 870 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 SLC18A3Q16572 532 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 CA9Q16790 459 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 HNRNPA1L2Q32P51 320 aaKnown RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 TTC31Q49AM3 519 aaPredicted RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 AASDHQ4L235 1098 aaPredicted RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 ERMARDQ5T6L9 678 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 ACBD5Q5T8D3 534 aaPredicted RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 ZNF776Q68DI1 518 aaPredicted RBP10.37□□□□□ -0.75
HERC1-212ENST00000561348 SARM1Q6SZW1 724 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 SLC36A4Q6YBV0 504 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 Q6ZVU0 165 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 BNIPLQ7Z465 357 aa10.37□□□□□ -0.75
HERC1-212ENST00000561348 SETD3Q86TU7 594 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms