RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TFR2Q9UP52 801 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 SCINQ9Y6U3 715 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 DOCK9Q9BZ29 2069 aa14.27□□□□□ -0.13
TPM1-230ENST00000561266 CFAP54Q96N23 3096 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 IGHV1OR15-9A0A0B4J2B8 117 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 RNF103O00237 685 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 SMAD6O43541 496 aaKnown RBP14.26□□□□□ -0.13
TPM1-230ENST00000561266 CREB3O43889 395 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 ALDH1A2O94788 518 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 ASLP04424 464 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 SRPRAP08240 638 aaKnown RBP14.26□□□□□ -0.13
TPM1-230ENST00000561266 OR1E1P30953 314 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 L1CAMP32004 1257 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 CCDC6Q16204 474 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 RWDD4Q6NW29 188 aaKnown RBP14.26□□□□□ -0.13
TPM1-230ENST00000561266 KIAA1324Q6UXG2 1013 aaKnown RBP14.26□□□□□ -0.13
TPM1-230ENST00000561266 LINGO4Q6UY18 593 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 SETD3Q86TU7 594 aaPredicted RBP14.26□□□□□ -0.13
TPM1-230ENST00000561266 CCDC117Q8IWD4 279 aaPredicted RBP14.26□□□□□ -0.13
TPM1-230ENST00000561266 ZNF557Q8N988 423 aaPredicted RBP14.26□□□□□ -0.13
TPM1-230ENST00000561266 TBC1D31Q96DN5 1066 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 ZC3H10Q96K80 434 aaKnown RBP14.26□□□□□ -0.13
TPM1-230ENST00000561266 FAM129BQ96TA1 746 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 PRDM16Q9HAZ2 1276 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 TMEM51Q9NW97 253 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 TMEM248Q9NWD8 314 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 VPS51Q9UID3 782 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 ANAPC7Q9UJX3 599 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 VPS28Q9UK41 221 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 CYP8B1Q9UNU6 501 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 PI4KAP42356 2102 aa14.26□□□□□ -0.13
TPM1-230ENST00000561266 AKR1B10O60218 316 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 MOCS3O95396 460 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 C7P10643 843 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 RHOQP17081 205 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 METAP1P53582 386 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 RPS14P62263 151 aaKnown RBP14.25□□□□□ -0.13
TPM1-230ENST00000561266 ARF5P84085 180 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 GNA12Q03113 381 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 STARD3Q14849 445 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 HNRNPA1L2Q32P51 320 aaKnown RBP14.25□□□□□ -0.13
TPM1-230ENST00000561266 USP39Q53GS9 565 aaKnown RBP14.25□□□□□ -0.13
TPM1-230ENST00000561266 EFHC2Q5JST6 749 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 KCNT1Q5JUK3 1230 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 ERMARDQ5T6L9 678 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 CNGA4Q8IV77 575 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 STK40Q8N2I9 435 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 OR2T3Q8NH03 318 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 MUC3BQ9H195 1237 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 SMOC1Q9H4F8 434 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 DHX35Q9H5Z1 703 aaKnown RBP14.25□□□□□ -0.13
TPM1-230ENST00000561266 MRPL47Q9HD33 250 aaKnown RBP14.25□□□□□ -0.13
TPM1-230ENST00000561266 ZNHIT6Q9NWK9 470 aaKnown RBP14.25□□□□□ -0.13
TPM1-230ENST00000561266 USP36Q9P275 1121 aaKnown RBP14.25□□□□□ -0.13
TPM1-230ENST00000561266 USP18Q9UMW8 372 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 AP4E1Q9UPM8 1137 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 MFHAS1Q9Y4C4 1052 aa14.25□□□□□ -0.13
TPM1-230ENST00000561266 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 ILVBLA1L0T0 632 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 ATP9BO43861 1147 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 SYNCRIPO60506 623 aaKnown RBP14.24□□□□□ -0.13
TPM1-230ENST00000561266 ZNF821O75541 412 aaPredicted RBP14.24□□□□□ -0.13
TPM1-230ENST00000561266 TPM1P09493 284 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 H2AFZP0C0S5 128 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 SRCP12931 536 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 GOT1P17174 413 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 FECHP22830 423 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 EPHB2P29323 1055 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 TAS2R40P59535 323 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 SLC25A11Q02978 314 aaKnown RBP14.24□□□□□ -0.13
TPM1-230ENST00000561266 DLG2Q15700 870 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 SMTNL2Q2TAL5 461 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 ATP13A4Q4VNC1 1196 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 ACBD5Q5T8D3 534 aaPredicted RBP14.24□□□□□ -0.13
TPM1-230ENST00000561266 PMS2CLQ68D20 193 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 LEKR1Q6ZMV7 388 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 H2AFVQ71UI9 128 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 TP53INP2Q8IXH6 220 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 TMEFF1Q8IYR6 380 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 SH2D3CQ8N5H7 860 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 NIPA2Q8N8Q9 360 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 KDM1BQ8NB78 822 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 ZNF564Q8TBZ8 553 aaPredicted RBP14.24□□□□□ -0.13
TPM1-230ENST00000561266 ARHGEF2Q92974 986 aaKnown RBP14.24□□□□□ -0.13
TPM1-230ENST00000561266 SIPA1Q96FS4 1042 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 CCDC42Q96M95 316 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 SPON2Q9BUD6 331 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 ACE2Q9BYF1 805 aaPredicted RBP14.24□□□□□ -0.13
TPM1-230ENST00000561266 DEF6Q9H4E7 631 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 ITM2CQ9NQX7 267 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 SUN2Q9UH99 717 aa14.24□□□□□ -0.13
TPM1-230ENST00000561266 ADAMTS9Q9P2N4 1935 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 SOWAHDA6NJG2 315 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 WASH4PA8MWX3 477 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 PLK4O00444 970 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 RNF8O76064 485 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 TMEM253P0C7T8 217 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 RARAP10276 462 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 PCK1P35558 622 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 PTGER3P43115 390 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms