RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TKTL2Q9H0I9 626 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.44■□□□□ 0.22
LMX1B-204ENST00000561065 STAP1Q9ULZ2 295 aa16.44■□□□□ 0.22
LMX1B-204ENST00000561065 EDDM13A0A1B0GTR0 161 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 A0A1W2PP55 124 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 GOLGA8SH3BPF8 625 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 IGHV4-34P06331 123 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 PSMD8P48556 350 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 SLC12A1Q13621 1099 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 NCAPHQ15003 741 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 RAB6CQ53S08 254 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 PPP1R2P3Q6NXS1 205 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 APTXQ7Z2E3 356 aaKnown RBP16.43■□□□□ 0.22
LMX1B-204ENST00000561065 STK40Q8N2I9 435 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 AADATQ8N5Z0 425 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 SIK2Q9H0K1 926 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 RAB6CQ9H0N0 254 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 NLRC4Q9NPP4 1024 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 FBXL12Q9NXK8 326 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 TMEM59LQ9UK28 342 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 MYO6Q9UM54 1294 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 FNDC3AQ9Y2H6 1198 aaKnown RBP16.43■□□□□ 0.22
LMX1B-204ENST00000561065 DOCK9Q9BZ29 2069 aa16.43■□□□□ 0.22
LMX1B-204ENST00000561065 CHD5Q8TDI0 1954 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 A0A1B0GVT2 93 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 TARSL2A2RTX5 802 aaKnown RBP16.42■□□□□ 0.22
LMX1B-204ENST00000561065 CYP1A1P04798 512 aaPredicted RBP16.42■□□□□ 0.22
LMX1B-204ENST00000561065 TPM3P06753 285 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 CDR2Q01850 454 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 SLC25A52Q3SY17 297 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 BRMS1LQ5PSV4 323 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 RNF219Q5W0B1 726 aaPredicted RBP16.42■□□□□ 0.22
LMX1B-204ENST00000561065 USP30Q70CQ3 517 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 EMC1Q8N766 993 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 CFAP57Q96MR6 1250 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 PSMB7Q99436 277 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 FEM1AQ9BSK4 669 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 EBF2Q9HAK2 575 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 SGK2Q9HBY8 427 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 TM9SF3Q9HD45 589 aa16.42■□□□□ 0.22
LMX1B-204ENST00000561065 METTL5Q9NRN9 209 aaKnown RBP16.42■□□□□ 0.22
LMX1B-204ENST00000561065 IGF2RP11717 2491 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 SYCE3A1L190 88 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 SH3BP5O60239 455 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 FSBPO95073 299 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 FERP16591 822 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 DRD3P35462 400 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 CSNK1EP49674 416 aaKnown RBP16.41■□□□□ 0.22
LMX1B-204ENST00000561065 OXCT1P55809 520 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 DEUP1Q05D60 604 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 KCNT1Q5JUK3 1230 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 NCEH1Q6PIU2 408 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 TMEM121BQ9BXQ6 578 aaPredicted RBP16.41■□□□□ 0.22
LMX1B-204ENST00000561065 ZDHHC5Q9C0B5 715 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 NEUROG2Q9H2A3 272 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 SLC32A1Q9H598 525 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 WDCPQ9H6R7 721 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
LMX1B-204ENST00000561065 ZNF212Q9UDV6 495 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 ADAMTS1Q9UHI8 967 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 SCML1Q9UN30 329 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 TBC1D30Q9Y2I9 924 aa16.41■□□□□ 0.22
LMX1B-204ENST00000561065 CABIN1Q9Y6J0 2220 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 A0A1W2PQC6 194 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 FAM47DPA6NHR8 397 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 PLK4O00444 970 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 SNAP91O60641 907 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 CLDN11O75508 207 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 RNASEH2AO75792 299 aaKnown RBP16.4■□□□□ 0.22
LMX1B-204ENST00000561065 GJB6O95452 261 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 DESP17661 470 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 SLC8A1P32418 973 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 VASPP50552 380 aaPredicted RBP16.4■□□□□ 0.22
LMX1B-204ENST00000561065 GALCP54803 685 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 ADPRHP54922 357 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 CDH4P55283 916 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 SIM1P81133 766 aaPredicted RBP16.4■□□□□ 0.22
LMX1B-204ENST00000561065 SULT2A1Q06520 285 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 PTP4A2Q12974 167 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 ELAVL3Q14576 367 aaKnown RBP16.4■□□□□ 0.22
LMX1B-204ENST00000561065 KIF19Q2TAC6 998 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 KIAA0895LQ68EN5 471 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 Q6ZVU0 165 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 ARCQ7LC44 396 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 PHLDB2Q86SQ0 1253 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 FAM131BQ86XD5 332 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 NAXDQ8IW45 347 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 SLC30A5Q8TAD4 765 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 FAM131CQ96AQ9 280 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 IQCDQ96DY2 449 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 C11orf70Q9BRQ4 267 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 EDEM3Q9BZQ6 932 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 GAREM1Q9H706 876 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 OSGEPQ9NPF4 335 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 MPP6Q9NZW5 540 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 VPS28Q9UK41 221 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 SARDHQ9UL12 918 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 FZD4Q9ULV1 537 aa16.4■□□□□ 0.22
LMX1B-204ENST00000561065 IGLV3-10A0A075B6K4 115 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms