RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 NT5C1BQ96P26 610 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 GSDMAQ96QA5 445 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 DNAI2Q9GZS0 605 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 TMEM245Q9H330 911 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 GAREM1Q9H706 876 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 PRSS16Q9NQE7 514 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 ABCC13Q9NSE7 274 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 OLA1Q9NTK5 396 aaKnown RBP7.51□□□□□ -1.21
GABPB1-211ENST00000561010 RMND1Q9NWS8 449 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 SERGEFQ9UGK8 458 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 CYTH4Q9UIA0 394 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 INTS6Q9UL03 887 aaKnown RBP7.51□□□□□ -1.21
GABPB1-211ENST00000561010 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.51□□□□□ -1.21
GABPB1-211ENST00000561010 NAALADL1Q9UQQ1 740 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 NEUROG3Q9Y4Z2 214 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 ATP6V1DQ9Y5K8 247 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 SNX11Q9Y5W9 270 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 PTPRQQ9UMZ3 2332 aa7.51□□□□□ -1.21
GABPB1-211ENST00000561010 GOLGA6L4A6NEF3 574 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 UPK3BL1B0FP48 263 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 UPK3BL2E5RIL1 263 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 CBX4O00257 560 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 PLK4O00444 970 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 ACSL4O60488 711 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 ICMTO60725 284 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 FSBPO95073 299 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 SMC2O95347 1197 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 ATXN1LP0C7T5 689 aaKnown RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 SETSIPP0DME0 302 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 KRT5P13647 590 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 VAV1P15498 845 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 EPB42P16452 691 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 TBXAS1P24557 533 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 MPSTP25325 297 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 CSKP41240 450 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 MATKP42679 507 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 STK19P49842 368 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 IDH3AP50213 366 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 CLDN6P56747 220 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 YWHAEP62258 255 aaKnown RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 LRRC63Q05C16 580 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 TYRO3Q06418 890 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 UBAP2LQ14157 1087 aaKnown RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 EIF4HQ15056 248 aaKnown RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 KIF19Q2TAC6 998 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 HLA-BQ31612 363 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 COBLL1Q53SF7 1204 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 PRAMEF14Q5SWL7 426 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 PIK3R6Q5UE93 754 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 C19orf48Q6RUI8 117 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 RABEPKQ7Z6M1 372 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 KIAA0907Q7Z7F0 614 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 TAC4Q86UU9 113 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 TREML1Q86YW5 311 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 DHX40Q8IX18 779 aaKnown RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 APCDD1Q8J025 514 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 TTC39CQ8N584 583 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 DQX1Q8TE96 717 aaKnown RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 FAM149B1Q96BN6 582 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 BIRC7Q96CA5 298 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 ABHD17AQ96GS6 310 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 FAXDC2Q96IV6 333 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 LMLNQ96KR4 655 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 FCRL2Q96LA5 508 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 CRACR2AQ9BSW2 395 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 NUP58Q9BVL2 599 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 SLC2A11Q9BYW1 496 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 INTS2Q9H0H0 1204 aaKnown RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 FAM124BQ9H5Z6 455 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 CAAP1Q9H8G2 361 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 CNGB3Q9NQW8 809 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 ST7Q9NRC1 585 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 TM7SF3Q9NS93 570 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 SUSD2Q9UGT4 822 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 PCOLCE2Q9UKZ9 415 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 ATXN7L1Q9ULK2 861 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 MSRB2Q9Y3D2 182 aa7.5□□□□□ -1.21
GABPB1-211ENST00000561010 ARHGEF17Q96PE2 2063 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-211ENST00000561010 SYNJ2BP-COX16A0A087WUM0 186 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 FAM149AA5PLN7 773 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 TTC34A8MYJ7 566 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 PSMA7O14818 248 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 WNT9AO14904 365 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 NPC1O15118 1278 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 MID1O15344 667 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 CBFA2T3O75081 653 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 SIN3BO75182 1162 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 LETM1O95202 739 aaPredicted RBP7.49□□□□□ -1.21
GABPB1-211ENST00000561010 SEMA4FO95754 770 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 IGLV3-19P01714 112 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 PAEPP09466 180 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 DLDP09622 509 aaKnown RBP7.49□□□□□ -1.21
GABPB1-211ENST00000561010 POLR2EP19388 210 aaKnown RBP7.49□□□□□ -1.21
GABPB1-211ENST00000561010 OXTRP30559 389 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 IRAK1P51617 712 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 ARSDP51689 593 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 ZNF132P52740 706 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 METAP1P53582 386 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 RING1Q06587 406 aa7.49□□□□□ -1.21
GABPB1-211ENST00000561010 SCAPQ12770 1279 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms