RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CFAP45Q9UL16 551 aa18.39■□□□□ 0.53
TSPAN3-208ENST00000560514 PCDHA7Q9UN72 937 aa18.39■□□□□ 0.53
TSPAN3-208ENST00000560514 PIK3R2O00459 728 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 MYL1P05976 194 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 CSRP3P50461 194 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 KCNMA1Q12791 1236 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 FOXD4L6Q3SYB3 417 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 ACCSLQ4AC99 568 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 KIAA1614Q5VZ46 1190 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 FOXD4L3Q6VB84 417 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 CCDC81Q6ZN84 652 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 HSCBQ8IWL3 235 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 APCDD1Q8J025 514 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 LGI2Q8N0V4 545 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 APOLD1Q96LR9 279 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 MYOCQ99972 504 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 DUSP23Q9BVJ7 150 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 CALN1Q9BXU9 219 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 USP29Q9HBJ7 922 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 ASCL3Q9NQ33 180 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 WDR70Q9NW82 654 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 KIAA1257Q9ULG3 409 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 SATB2Q9UPW6 733 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 TLR6Q9Y2C9 796 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 CA5BQ9Y2D0 317 aa18.38■□□□□ 0.53
TSPAN3-208ENST00000560514 K7ENP7 123 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 SLC31A1O15431 190 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 APOEP02649 317 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 HSP90AA1P07900 732 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 VAV1P15498 845 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 SLC12A1Q13621 1099 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 INO80CQ6PI98 192 aaPredicted RBP18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 CHSY1Q86X52 802 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 MYEOVQ96EZ4 313 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 FCRL2Q96LA5 508 aaPredicted RBP18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 PPP1R9BQ96SB3 815 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 PREBQ9HCU5 417 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 NLGN3Q9NZ94 848 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 MAPK8IP1Q9UQF2 711 aa18.37■□□□□ 0.53
TSPAN3-208ENST00000560514 O00370 1275 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 ACTN4O43707 911 aaKnown RBP18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 PIAS2O75928 621 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 AKT2P31751 481 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 NUMBP49757 651 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 METAP1P53582 386 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 CCDC15Q0P6D6 951 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 CNTN1Q12860 1018 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 CUL2Q13617 745 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 ISXQ2M1V0 245 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 FOXD4L5Q5VV16 416 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 IFI44Q8TCB0 444 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 FOXD4L4Q8WXT5 416 aaPredicted RBP18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 RNF34Q969K3 372 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 GRAMD1AQ96CP6 724 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 SLC25A13Q9UJS0 675 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 RCOR1Q9UKL0 485 aa18.36■□□□□ 0.53
TSPAN3-208ENST00000560514 FBXO21O94952 628 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 F13A1P00488 732 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 EPB41P11171 864 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 MYF5P13349 255 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 PDGFRAP16234 1089 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 OXCT1P55809 520 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 NFATC3Q12968 1075 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 NNTQ13423 1086 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 AGBL4Q5VU57 503 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 RAP1GAP2Q684P5 730 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 IGF2-ASQ6U949 168 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 LCLAT1Q6UWP7 414 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 TMEM145Q8NBT3 493 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 DQX1Q8TE96 717 aaKnown RBP18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 FAM131CQ96AQ9 280 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 FAM149B1Q96BN6 582 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 EEF2KMTQ96G04 330 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 MIS12Q9H081 205 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 USP25Q9UHP3 1055 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 SARDHQ9UL12 918 aa18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 FARP1Q9Y4F1 1045 aaPredicted RBP18.35■□□□□ 0.53
TSPAN3-208ENST00000560514 F5H5T6 163 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 M0QYV0 167 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 BNIP3LO60238 219 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 PRLRP16471 622 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 TACR2P21452 398 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 TCERG1LQ5VWI1 586 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 PMF1Q6P1K2 205 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 FOXR1Q6PIV2 292 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 ARL14Q8N4G2 192 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 CLEC4CQ8WTT0 213 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 SLC35F5Q8WV83 523 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 KLK6Q92876 244 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 ERCC4Q92889 916 aaPredicted RBP18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 HSFY1Q96LI6 401 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 SLC46A1Q96NT5 459 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 DYRK4Q9NR20 520 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 DNAJC28Q9NX36 388 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 NCKIPSDQ9NZQ3 722 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 IL17BQ9UHF5 180 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 SLC12A6Q9UHW9 1150 aa18.34■□□□□ 0.53
TSPAN3-208ENST00000560514 PIEZO2Q9H5I5 2752 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms