RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CWC15Q9P013 229 aaKnown RBP12.36□□□□□ -0.43
RABGGTA-215ENST00000560207 ZNF212Q9UDV6 495 aa12.36□□□□□ -0.43
RABGGTA-215ENST00000560207 EFR3BQ9Y2G0 817 aa12.36□□□□□ -0.43
RABGGTA-215ENST00000560207 PPP2R2CQ9Y2T4 447 aa12.36□□□□□ -0.43
RABGGTA-215ENST00000560207 ARIH1Q9Y4X5 557 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-215ENST00000560207 NYNRINQ9P2P1 1898 aaKnown RBP12.36□□□□□ -0.43
RABGGTA-215ENST00000560207 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
RABGGTA-215ENST00000560207 CACNA1IQ9P0X4 2223 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 FAM72CH0Y354 149 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 GALR2O43603 387 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 BUB1O43683 1085 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 PI15O43692 258 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 SYNCRIPO60506 623 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 GOT1P17174 413 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 ERCC2P18074 760 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 KDELR1P24390 212 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 MTAPQ13126 283 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 BYSLQ13895 437 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 DPYSQ14117 519 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 CRY1Q16526 586 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 SMTNL2Q2TAL5 461 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 INO80DQ53TQ3 878 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 C2orf27AQ580R0 203 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 FSCBQ5H9T9 825 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 FAM72AQ5TYM5 149 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 IL31Q6EBC2 164 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 FAM72DQ6L9T8 149 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 SERPINA13PQ6UXR4 307 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 TFAP2DQ7Z6R9 452 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 FAM72BQ86X60 149 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 PYROXD2Q8N2H3 581 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 TMEM105Q8N8V8 129 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 IL17RCQ8NAC3 791 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 EXD1Q8NHP7 514 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 TSC1Q92574 1164 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 FAF2Q96CS3 445 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 MYEOVQ96EZ4 313 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 ALG14Q96F25 216 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 CSPG4P5Q96PW8 444 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 KCTD15Q96SI1 283 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 CALN1Q9BXU9 219 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 ACE2Q9BYF1 805 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 CEP44Q9C0F1 390 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 ATP13A1Q9HD20 1204 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 CLEC4EQ9ULY5 219 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 GUCA1BQ9UMX6 200 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 NEU3Q9UQ49 428 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 ERVW-1Q9UQF0 538 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 HS3ST2Q9Y278 367 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 PCDHA3Q9Y5H8 950 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 OR51B4Q9Y5P0 310 aa12.35□□□□□ -0.43
RABGGTA-215ENST00000560207 FANCMQ8IYD8 2048 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 MUC22E2RYF6 1773 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 EDDM13A0A1B0GTR0 161 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 MACROD2A1Z1Q3 448 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 LRRD1A4D1F6 860 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 RCCD1A6NED2 376 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 KDELR3O43731 214 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 RNASEH1O60930 286 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 KLF8O95600 359 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 C7P10643 843 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 HOXB2P14652 356 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 MX2P20592 715 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 CTNNA2P26232 953 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 CNR2P34972 360 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 CTNNA1P35221 906 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 TIE1P35590 1138 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 GGCXP38435 758 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ARSEP51690 589 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 RWDD2BP57060 319 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 TAS2R40P59535 323 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ZBTB16Q05516 673 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ZNF33AQ06730 810 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 DPYSL3Q14195 570 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ZNF234Q14588 700 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 RFTN1Q14699 578 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 CA9Q16790 459 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 FUT11Q495W5 492 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 FNDC3BQ53EP0 1204 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ANKRD20A8PQ5CZ79 823 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 DSG4Q86SJ6 1040 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 C11orf74Q86VG3 221 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 PLPP6Q8IY26 295 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ALLCQ8N6M5 410 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 LRRC57Q8N9N7 239 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 TXNDC5Q8NBS9 432 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 WFDC5Q8TCV5 224 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 EZH1Q92800 747 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ARHGEF2Q92974 986 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ISG20Q96AZ6 181 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ZNF830Q96NB3 372 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 ZNF599Q96NL3 588 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 BRD8Q9H0E9 1235 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 TMEM245Q9H330 911 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 PRMT8Q9NR22 394 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 RBM12Q9NTZ6 932 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 EBF1Q9UH73 591 aa12.34□□□□□ -0.43
RABGGTA-215ENST00000560207 DNAI1Q9UI46 699 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms