RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 FAM83CQ9BQN1 747 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 TMEM121Q9BTD3 319 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 SPON2Q9BUD6 331 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 BRD9Q9H8M2 597 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 SP110Q9HB58 689 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 HPS4Q9NQG7 708 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 MARK1Q9P0L2 795 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 LIMD1Q9UGP4 676 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 AMACRQ9UHK6 382 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 CLEC4EQ9ULY5 219 aa10.69□□□□□ -0.7
TPM1-221ENST00000559831 A0A0D9SEW6 157 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 ILVBLA1L0T0 632 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 HACD1B0YJ81 288 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 SGK1O00141 431 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 CHADO15335 359 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 NCAM2O15394 837 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 KCNN4O15554 427 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 ECEL1O95672 775 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 ITGAVP06756 1048 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 VAV1P15498 845 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 MZF1P28698 734 aaPredicted RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 RBL1P28749 1068 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 CD70P32970 193 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 GARSP41250 739 aaKnown RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 OXCT1P55809 520 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 YBEYP58557 167 aaPredicted RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 DR1Q01658 176 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 LMAN2Q12907 356 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 NR1H3Q13133 447 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 XRCC4Q13426 336 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 RUNX3Q13761 415 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 TRIP13Q15645 432 aaPredicted RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 OASLQ15646 514 aaKnown RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 AAK1Q2M2I8 961 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 PARP15Q460N3 678 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 SLC45A4Q5BKX6 768 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 FSCBQ5H9T9 825 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 FAM182AQ5T1J6 154 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 MPP7Q5T2T1 576 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 C8orf74Q6P047 294 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 DRICH1Q6PGQ1 229 aaPredicted RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 CCDC13Q8IYE1 715 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 MMGT1Q8N4V1 131 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 ATL2Q8NHH9 583 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 CCDC26Q8TAB7 109 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 FIBINQ8TAL6 211 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 CSGALNACT1Q8TDX6 532 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 GRK7Q8WTQ7 553 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 NKD2Q969F2 451 aaPredicted RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 RUNDC3BQ96NL0 473 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 XPO6Q96QU8 1125 aaKnown RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 MAGEH1Q9H213 219 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 ECT2Q9H8V3 914 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 ATP13A1Q9HD20 1204 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 DNAJC17Q9NVM6 304 aaKnown RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 GTSE1Q9NYZ3 720 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 KIAA1522Q9P206 1035 aaPredicted RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM1-221ENST00000559831 VPS28Q9UK41 221 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 TBC1D30Q9Y2I9 924 aa10.68□□□□□ -0.7
TPM1-221ENST00000559831 V9GYY5 206 aaPredicted RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 TCF20Q9UGU0 1960 aaKnown RBP10.68□□□□□ -0.7
TPM1-221ENST00000559831 BCLAF3A2AJT9 711 aaKnown RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 CFAP69A5D8W1 941 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 OTOL1A6NHN0 477 aaPredicted RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 TTI1O43156 1089 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 HOXC11O43248 304 aaPredicted RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 RAD51CO43502 376 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 IFNB1P01574 187 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 ASGR2P07307 311 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 RHOXF2BP0C7M4 288 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 ETS1P14921 441 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 ETFBP38117 255 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 GDF10P55107 478 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 LMNB2Q03252 620 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 KDSRQ06136 332 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 PPIDQ08752 370 aaKnown RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 SERINC3Q13530 473 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 DHX34Q14147 1143 aaKnown RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 PRKD1Q15139 912 aaPredicted RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 PPP1R7Q15435 360 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 HEATR6Q6AI08 1181 aaKnown RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 CCDC70Q6NSX1 233 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 ZNF783Q6ZMS7 281 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 LEKR1Q6ZMV7 388 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 PRUNE1Q86TP1 453 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 C12orf40Q86WS4 652 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 ALLCQ8N6M5 410 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 ZNF557Q8N988 423 aaPredicted RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 CCDC89Q8N998 374 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 FAM71DQ8N9W8 422 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 USP33Q8TEY7 942 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 HTR3CQ8WXA8 447 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 ARHGEF2Q92974 986 aaKnown RBP10.67□□□□□ -0.7
TPM1-221ENST00000559831 HDAC11Q96DB2 347 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 FERMT1Q9BQL6 677 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 RHOXF2Q9BQY4 288 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 TRIM51Q9BSJ1 452 aa10.67□□□□□ -0.7
TPM1-221ENST00000559831 CEP41Q9BYV8 373 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms