RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 HIF1ANQ9NWT6 349 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 GJD2Q9UKL4 321 aa4.13□□□□□ -1.75
SPG11-218ENST00000559754 A0A087WV62 115 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 CYP3A7-CYP3A51PA0A087WV96 503 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 J3KRW8 73 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 TNFRSF13BO14836 293 aaPredicted RBP4.12□□□□□ -1.75
SPG11-218ENST00000559754 NGFRP08138 427 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 CYP3A7P24462 503 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 ARRB2P32121 409 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 MLH1P40692 756 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 STAT1P42224 750 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 RBM6P78332 1123 aaKnown RBP4.12□□□□□ -1.75
SPG11-218ENST00000559754 SHC2P98077 582 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 POU5F1Q01860 360 aaKnown RBP4.12□□□□□ -1.75
SPG11-218ENST00000559754 ICA1Q05084 483 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 PMPCAQ10713 525 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 ALG10Q5BKT4 473 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 ALG10BQ5I7T1 473 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 Q5PR19 223 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 INTS11Q5TA45 600 aaKnown RBP4.12□□□□□ -1.75
SPG11-218ENST00000559754 PGBD2Q6P3X8 592 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 MAATS1Q7Z4T9 603 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.12□□□□□ -1.75
SPG11-218ENST00000559754 GATAD2AQ86YP4 633 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 MYCT1Q8N699 235 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 IQCF1Q8N6M8 205 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 C1orf131Q8NDD1 294 aaKnown RBP4.12□□□□□ -1.75
SPG11-218ENST00000559754 MUL1Q969V5 352 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 ZNF479Q96JC4 524 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 CCDC134Q9H6E4 229 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 TXNRD2Q9NNW7 524 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 RASSF1Q9NS23 344 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 PLK2Q9NYY3 685 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 PDP2Q9P2J9 529 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 PCDHA7Q9UN72 937 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 SLC12A4Q9UP95 1085 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 ZBTB1Q9Y2K1 713 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 PCDHGB2Q9Y5G2 931 aa4.12□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3DA0A087WVF3 549 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3IA0A087WXS9 549 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3EA0A087X179 549 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3KA0A087X1G2 549 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3BA6NDS4 549 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3FA6NER0 549 aaPredicted RBP4.11□□□□□ -1.75
SPG11-218ENST00000559754 KCNJ18B7U540 433 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3LB9A6J9 549 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 CCER2I3L3R5 266 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 PIP5K1BO14986 540 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 LARGE1O95461 756 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3HP0C7X1 549 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 ABCB4P21439 1286 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TNFAIP3P21580 790 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 CHRNA5P30532 468 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 AKT1P31749 480 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TECP42680 631 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 RFX2P48378 723 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 RXRGP48443 463 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 RASSF2P50749 326 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 ADPRHP54922 357 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 FOXL2P58012 376 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 BLMHQ13867 455 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 CCDC38Q502W7 563 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 ASPHD1Q5U4P2 390 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3GQ6DHY5 549 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3CQ6IPX1 549 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 HMBOX1Q6NT76 420 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 RSRC2Q7L4I2 434 aaKnown RBP4.11□□□□□ -1.75
SPG11-218ENST00000559754 KDELC2Q7Z4H8 507 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 SYTL1Q8IYJ3 562 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TBC1D3Q8IZP1 549 aaPredicted RBP4.11□□□□□ -1.75
SPG11-218ENST00000559754 EXD3Q8N9H8 876 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 IPO4Q8TEX9 1081 aaKnown RBP4.11□□□□□ -1.75
SPG11-218ENST00000559754 ATP2A3Q93084 1043 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 KIAA1191Q96A73 305 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 MCRS1Q96EZ8 462 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TMEM41AQ96HV5 264 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 PRPF18Q99633 342 aaKnown RBP4.11□□□□□ -1.75
SPG11-218ENST00000559754 TMEM120AQ9BXJ8 343 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 OSBPL5Q9H0X9 879 aaPredicted RBP4.11□□□□□ -1.75
SPG11-218ENST00000559754 ISCUQ9H1K1 167 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 TP63Q9H3D4 680 aaPredicted RBP4.11□□□□□ -1.75
SPG11-218ENST00000559754 SIRT3Q9NTG7 399 aaPredicted RBP4.11□□□□□ -1.75
SPG11-218ENST00000559754 RNF146Q9NTX7 359 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 WNT16Q9UBV4 365 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.11□□□□□ -1.75
SPG11-218ENST00000559754 POLG2Q9UHN1 485 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 RAB21Q9UL25 225 aa4.11□□□□□ -1.75
SPG11-218ENST00000559754 DYTNA2CJ06 578 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 C4orf47A7E2U8 309 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 MCIDASD6RGH6 385 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 M0QYT0 321 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 GTPBP1O00178 669 aaKnown RBP4.1□□□□□ -1.75
SPG11-218ENST00000559754 TCERG1O14776 1098 aaKnown RBP4.1□□□□□ -1.75
SPG11-218ENST00000559754 NCAM2O15394 837 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 SLC28A2O43868 658 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 RPP40O75818 363 aaKnown RBP4.1□□□□□ -1.75
SPG11-218ENST00000559754 NEURL1O76050 574 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 EGR4Q05215 589 aa4.1□□□□□ -1.75
SPG11-218ENST00000559754 PDE1CQ14123 709 aaPredicted RBP4.1□□□□□ -1.75
SPG11-218ENST00000559754 ASIC2Q16515 512 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms