RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 EFL1Q7Z2Z2 1120 aaKnown RBP11.13□□□□□ -0.63
TRAF3-207ENST00000559734 DSG4Q86SJ6 1040 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 TRIM69Q86WT6 500 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 FAM186BQ8IYM0 893 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 LGI2Q8N0V4 545 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 TTC39CQ8N584 583 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 EXD3Q8N9H8 876 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 SEMA4DQ92854 862 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 SPAG5Q96R06 1193 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
TRAF3-207ENST00000559734 TMEM8AQ9HCN3 771 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 CNGB3Q9NQW8 809 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 DNAJC28Q9NX36 388 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 NLGN3Q9NZ94 848 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 SARDHQ9UL12 918 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 MTMR6Q9Y217 621 aa11.13□□□□□ -0.63
TRAF3-207ENST00000559734 A0A1W2PNU3 283 aaPredicted RBP11.12□□□□□ -0.63
TRAF3-207ENST00000559734 A0A1W2PQU0 124 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 NEMP2A6NFY4 417 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 C1QTNF3-AMACRE9PGA6 284 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 GP1BAP07359 652 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 GIMD1P0DJR0 217 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 NR2F2P24468 414 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 AKT2P31751 481 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 MXI1P50539 228 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 CLDN2P57739 230 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 FOXD4L6Q3SYB3 417 aaPredicted RBP11.12□□□□□ -0.63
TRAF3-207ENST00000559734 AGBL4Q5VU57 503 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 FAM46CQ5VWP2 391 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 RAP1GAP2Q684P5 730 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 KRT39Q6A163 491 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 GUSBP11Q6P575 273 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 FOXD4L3Q6VB84 417 aaPredicted RBP11.12□□□□□ -0.63
TRAF3-207ENST00000559734 PTAR1Q7Z6K3 402 aaPredicted RBP11.12□□□□□ -0.63
TRAF3-207ENST00000559734 CHSY1Q86X52 802 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 CEP57L1Q8IYX8 460 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 ARL14Q8N4G2 192 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 OR13H1Q8NG92 308 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 CLEC4CQ8WTT0 213 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 SLC46A1Q96NT5 459 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 DUSP23Q9BVJ7 150 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 KDM4CQ9H3R0 1056 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 ZSCAN16Q9H4T2 348 aaPredicted RBP11.12□□□□□ -0.63
TRAF3-207ENST00000559734 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
TRAF3-207ENST00000559734 NYNRINQ9P2P1 1898 aaKnown RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 ARID1BQ8NFD5 2236 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 LY6G6EA0A0G2JKS1 128 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 K7ESM1 405 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 TERTO14746 1132 aaKnown RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 KLRC4O43908 158 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 TNFSF15O95150 251 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 LTFP02788 710 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 SETSIPP0DME0 302 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 ZNF177Q13360 481 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 DRAP1Q14919 205 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 OR6B2Q6IFH4 312 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 RBM44Q6ZP01 1051 aaKnown RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 USP53Q70EK8 1073 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 CIR1Q86X95 450 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 TMEM145Q8NBT3 493 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 EXTL1Q92935 676 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 FCRL2Q96LA5 508 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 ZNF396Q96N95 335 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 NOX5Q96PH1 765 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 CCNL2Q96S94 520 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 MIS12Q9H081 205 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 USP29Q9HBJ7 922 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 PREBQ9HCU5 417 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 RAB20Q9NX57 234 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 TJP2Q9UDY2 1190 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 SERTAD1Q9UHV2 236 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 XPO7Q9UIA9 1087 aaKnown RBP11.11□□□□□ -0.63
TRAF3-207ENST00000559734 ENTPD2Q9Y5L3 495 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 U3KQA8 63 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 ATMQ13315 3056 aa11.11□□□□□ -0.63
TRAF3-207ENST00000559734 SCAMP1O15126 338 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 MAPK13O15264 365 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 TACR2P21452 398 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 HNRNPA2B1P22626 353 aaKnown RBP11.1□□□□□ -0.63
TRAF3-207ENST00000559734 PSMC2P35998 433 aaKnown RBP11.1□□□□□ -0.63
TRAF3-207ENST00000559734 SKOR1P84550 965 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 ARL13BQ3SXY8 428 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 LINC00303Q3SY05 128 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 FOXD4L5Q5VV16 416 aaPredicted RBP11.1□□□□□ -0.63
TRAF3-207ENST00000559734 IGF2-ASQ6U949 168 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 ZNF574Q6ZN55 896 aaPredicted RBP11.1□□□□□ -0.63
TRAF3-207ENST00000559734 Q6ZVU0 165 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 JAMLQ86YT9 394 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 SLC22A18ASQ8N1D0 253 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 FBXL13Q8NEE6 735 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 ZNF548Q8NEK5 533 aaPredicted RBP11.1□□□□□ -0.63
TRAF3-207ENST00000559734 DQX1Q8TE96 717 aaKnown RBP11.1□□□□□ -0.63
TRAF3-207ENST00000559734 TMEM174Q8WUU8 243 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 FOXD4L4Q8WXT5 416 aaPredicted RBP11.1□□□□□ -0.63
TRAF3-207ENST00000559734 KCTD13Q8WZ19 329 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 RNF34Q969K3 372 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 AZIN2Q96A70 460 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 FAM131CQ96AQ9 280 aa11.1□□□□□ -0.63
TRAF3-207ENST00000559734 FAM149B1Q96BN6 582 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms