RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 USP30Q70CQ3 517 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 STRADAQ7RTN6 431 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 IRF2BP2Q7Z5L9 587 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 C14orf80Q86SX3 495 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 CNGA4Q8IV77 575 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 EMC1Q8N766 993 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 JOSD2Q8TAC2 188 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 CEP76Q8TAP6 659 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 CENPIQ92674 756 aaPredicted RBP11.56□□□□□ -0.56
BMP4-204ENST00000558961 FEM1AQ9BSK4 669 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 ATXN2Q99700 1313 aaKnown RBP11.56□□□□□ -0.56
BMP4-204ENST00000558961 NUMA1Q14980 2115 aa11.56□□□□□ -0.56
BMP4-204ENST00000558961 PLXNA2O75051 1894 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.55□□□□□ -0.56
BMP4-204ENST00000558961 EDDM13A0A1B0GTR0 161 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 MED19A0JLT2 244 aaPredicted RBP11.55□□□□□ -0.56
BMP4-204ENST00000558961 FAM170AA1A519 330 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 DCDC2BA2VCK2 349 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 METTL12A8MUP2 240 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 E9PAM4 449 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 ZNF500O60304 480 aaPredicted RBP11.55□□□□□ -0.56
BMP4-204ENST00000558961 NDUFS2O75306 463 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 DNTTP04053 509 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 CALB1P05937 261 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 SKILP12757 684 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 ADKP55263 362 aaKnown RBP11.55□□□□□ -0.56
BMP4-204ENST00000558961 ZBED6P86452 979 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 ZNF177Q13360 481 aaPredicted RBP11.55□□□□□ -0.56
BMP4-204ENST00000558961 CCDC14Q49A88 953 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 ALFQ53S48 1182 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 SYCP2LQ5T4T6 812 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 WDR59Q6PJI9 974 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 SETD3Q86TU7 594 aaPredicted RBP11.55□□□□□ -0.56
BMP4-204ENST00000558961 FAM131BQ86XD5 332 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 CACUL1Q86Y37 369 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 CCDC112Q8NEF3 446 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 FRS2Q8WU20 508 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 RXFP2Q8WXD0 754 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 PTPRN2Q92932 1015 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 FAM131CQ96AQ9 280 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 AGPAT1Q99943 283 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 GPR174Q9BXC1 333 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 NUSAP1Q9BXS6 441 aaKnown RBP11.55□□□□□ -0.56
BMP4-204ENST00000558961 SIK2Q9H0K1 926 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 MTG2Q9H4K7 406 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 TMEM9BQ9NQ34 198 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 TMPRSS4Q9NRS4 437 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 SPTLC3Q9NUV7 552 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 ADAM22Q9P0K1 906 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 PPARGC1AQ9UBK2 798 aaKnown RBP11.55□□□□□ -0.56
BMP4-204ENST00000558961 SUSD2Q9UGT4 822 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 SLCO3A1Q9UIG8 710 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 SLC6A14Q9UN76 642 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 NEU3Q9UQ49 428 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 HS3ST2Q9Y278 367 aa11.55□□□□□ -0.56
BMP4-204ENST00000558961 LRRC53A6NM62 1247 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 SIGLEC16A6NMB1 481 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 TTC34A8MYJ7 566 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 ATP9BO43861 1147 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 CNTN5O94779 1100 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 KRT3P12035 628 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 ENGP17813 658 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 SDC4P31431 198 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 ACSL1P33121 698 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 RFC1P35251 1148 aaPredicted RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 NNMTP40261 264 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 PRKCIP41743 596 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 STK19P49842 368 aaPredicted RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 HDAC4P56524 1084 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 ATP11AP98196 1134 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 ELAVL3Q14576 367 aaKnown RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 CST6Q15828 149 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 C15orf59Q2T9L4 293 aaPredicted RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 TTC31Q49AM3 519 aaPredicted RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 RAB6CQ53S08 254 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 WDR45BQ5MNZ6 344 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 PPP1R15BQ5SWA1 713 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 RNF219Q5W0B1 726 aaPredicted RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 E4F1Q66K89 784 aaPredicted RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 IL31Q6EBC2 164 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 PPP1R2P3Q6NXS1 205 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 ZNF783Q6ZMS7 281 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 DEFB119Q8N690 84 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 DCAF4L2Q8NA75 395 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 OR8K1Q8NGG5 319 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 C1orf216Q8TAB5 229 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 SYN2Q92777 582 aaPredicted RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 NTAN1Q96AB6 310 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 VCPIP1Q96JH7 1222 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 RPL10LQ96L21 214 aaKnown RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 FAM129BQ96TA1 746 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 PSMB7Q99436 277 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 RAB6CQ9H0N0 254 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 PABPC3Q9H361 631 aaKnown RBP11.54□□□□□ -0.56
BMP4-204ENST00000558961 RETREG1Q9H6L5 497 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 SGK2Q9HBY8 427 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 ABHD10Q9NUJ1 306 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 AIPL1Q9NZN9 384 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 ADAMTS1Q9UHI8 967 aa11.54□□□□□ -0.56
BMP4-204ENST00000558961 FZD4Q9ULV1 537 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms