RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	CD70	P32970	193 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	HARS2	P49590	506 aa	Known RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	NUMB	P49757	651 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	TPMT	P51580	245 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	COPA	P53621	1224 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	ATXN3	P54252	364 aa	Predicted RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	YWHAE	P62258	255 aa	Known RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	SHC2	P98077	582 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	APBA1	Q02410	837 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	SEMA3B	Q13214	749 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	STIM1	Q13586	685 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	ENPP2	Q13822	863 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	MORC3	Q14149	939 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	STARD3	Q14849	445 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	OCLN	Q16625	522 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	PLEKHG6	Q3KR16	790 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	MPPE1	Q53F39	396 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	CCDC183	Q5T5S1	534 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	ADGRF1	Q5T601	910 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	NADSYN1	Q6IA69	706 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	GJB7	Q6PEY0	223 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	SERPINA13P	Q6UXR4	307 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	CHST9	Q7L1S5	443 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	PIP4P1	Q86T03	277 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	CPXM2	Q8N436	756 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	MINDY1	Q8N5J2	469 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	CEP76	Q8TAP6	659 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	TMA16	Q96EY4	203 aa	Known RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	SIPA1	Q96FS4	1042 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	SRRT	Q9BXP5	876 aa	Known RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	SLC2A11	Q9BYW1	496 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	MUC3B	Q9H195	1237 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	MIR1-1HG	Q9H1L0	117 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	NUP62CL	Q9H1M0	184 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	CLSTN2	Q9H4D0	955 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	CNGB3	Q9NQW8	809 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	ABCC13	Q9NSE7	274 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	OLA1	Q9NTK5	396 aa	Known RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	ABCB8	Q9NUT2	735 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	WSB2	Q9NYS7	404 aa	Predicted RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	STIM2	Q9P246	746 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	USP36	Q9P275	1121 aa	Known RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	KIAA1257	Q9ULG3	409 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	WASF3	Q9UPY6	502 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	NAALADL1	Q9UQQ1	740 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	HBS1L	Q9Y450	684 aa	Known RBP	7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	CFAP47	Q6ZTR5	3102 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	PCNX2	A6NKB5	2137 aa		7.27	□□□□□ -1.25
MARK3-215	ENST00000558787	FAM170A	A1A519	330 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	MEI4	A8MW99	385 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	TIMM44	O43615	452 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	HYAL3	O43820	417 aa	Predicted RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	SH3BP5	O60239	455 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	OPHN1	O60890	802 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	LTF	P02788	710 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	PAEP	P09466	180 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	NCAM1	P13591	858 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	KRT5	P13647	590 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	CD59	P13987	128 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	ZNF132	P52740	706 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	TBX4	P57082	545 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	SIM1	P81133	766 aa	Predicted RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	BNC1	Q01954	994 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	ARID5A	Q03989	594 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	NUMA1	Q14980	2115 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	CAMK4	Q16566	473 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	FNDC3B	Q53EP0	1204 aa	Known RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	FAM133B	Q5BKY9	247 aa	Known RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	PIK3R6	Q5UE93	754 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	DCAF12L1	Q5VU92	463 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	SYPL2	Q5VXT5	272 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	MBLAC2	Q68D91	279 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	MSANTD2	Q6P1R3	559 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	MMS22L	Q6ZRQ5	1243 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	ADIPOR2	Q86V24	386 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	CREBRF	Q8IUR6	639 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	TRIM59	Q8IWR1	403 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	CFAP52	Q8N1V2	620 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	HDDC3	Q8N4P3	179 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	ZCCHC9	Q8N567	271 aa	Known RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	STK32A	Q8WU08	396 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	UCMA	Q8WVF2	138 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	PRCC	Q92733	491 aa	Predicted RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	MEGF10	Q96KG7	1140 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	CRACR2A	Q9BSW2	395 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	SCNM1	Q9BWG6	230 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	KRTAP4-8	Q9BYQ9	185 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	GTPBP4	Q9BZE4	634 aa	Known RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	INTS2	Q9H0H0	1204 aa	Known RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	FAM124B	Q9H5Z6	455 aa	Predicted RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	IL21R	Q9HBE5	538 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	UBE2T	Q9NPD8	197 aa	Predicted RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	ST7	Q9NRC1	585 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	TJP2	Q9UDY2	1190 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	EIF2B4	Q9UI10	523 aa	Known RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	CYTH4	Q9UIA0	394 aa		7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	XPO7	Q9UIA9	1087 aa	Known RBP	7.26	□□□□□ -1.25
MARK3-215	ENST00000558787	STOML2	Q9UJZ1	356 aa		7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms