RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 MBL2P11226 248 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 HARS2P49590 506 aaKnown RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 PSTKQ8IV42 348 aaKnown RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 ARHGAP18Q8N392 663 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 GSDMBQ8TAX9 411 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 IGSF21Q96ID5 467 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SEC16BQ96JE7 1060 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 OLFM3Q96PB7 478 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC40A1Q9NP59 571 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 C20orf96Q9NUD7 363 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 HAUS2Q9NVX0 235 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC17A7Q9P2U7 560 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 DCTN4Q9UJW0 460 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SHROOM3Q8TF72 1996 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 PIRTP0C851 137 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 ITGB8P26012 769 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 ATP5C1P36542 298 aaKnown RBP11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 TMPRSS15P98073 1019 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 PAFAH1B3Q15102 231 aaKnown RBP11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 TEX44Q53QW1 395 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 NDUFAF2Q8N183 169 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 AZIN2Q96A70 460 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 CHRAC1Q9NRG0 131 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 PLK2Q9NYY3 685 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 TRPM5Q9NZQ8 1165 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 SCML2Q9UQR0 700 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 RALGAPA2Q2PPJ7 1873 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 F5H5T6 163 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 J3KR12 359 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 PGGT1BP53609 377 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 RPS24P62847 133 aaKnown RBP11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 TWF1Q12792 350 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC1A5Q15758 541 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 BRMS1LQ5PSV4 323 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 FBXL22Q6P050 247 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 RAPH1Q70E73 1250 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC26A11Q86WA9 606 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 PNPLA1Q8N8W4 532 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 CCDC197Q8NCU1 140 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 PSMG2Q969U7 264 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 HMCESQ96FZ2 354 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 RSRC1Q96IZ7 334 aaKnown RBP11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 CFHR5Q9BXR6 569 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 C11orf49Q9H6J7 331 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 ELAC1Q9H777 363 aaKnown RBP11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 SMAPO00193 183 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 CCL22O00626 93 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 RAMP2O60895 175 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 KRT38O76015 456 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 CKMP06732 381 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 POLBP06746 335 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 ATF6P18850 670 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 FGFR3P22607 806 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 GCAP28676 217 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 GLUD2P49448 558 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 ARMC2Q8NEN0 867 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 IGSF8Q969P0 613 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 C8orf48Q96LL4 319 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 TMEM109Q9BVC6 243 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC24A2Q9UI40 661 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 ACTL7AQ9Y615 435 aa11.04□□□□□ -0.64
CSPG4P5-201ENST00000558731 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 CBX4O00257 560 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 NCAM2O15394 837 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 KITP10721 976 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC2A3P11169 496 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 SP100P23497 879 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 SEMA5AQ13591 1074 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 ZNF235Q14590 738 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 POLD3Q15054 466 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 PRKD1Q15139 912 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 MS4A13Q5J8X5 152 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 ST13P5Q8NFI4 369 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 FAM136AQ96C01 138 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 ZYG11BQ9C0D3 744 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 PNPLA8Q9NP80 782 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 SAGE1Q9NXZ1 904 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 MARCOQ9UEW3 520 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 SEC24AO95486 1093 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 HAPLN1P10915 354 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 TUFMP49411 452 aaKnown RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 C16orf46Q6P387 395 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 ATXN2LQ8WWM7 1075 aaKnown RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 MAML1Q92585 1016 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 SERAC1Q96JX3 654 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 SIGLEC10Q96LC7 697 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 IARS2Q9NSE4 1012 aaKnown RBP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 SCN5AQ14524 2016 aa11.03□□□□□ -0.64
CSPG4P5-201ENST00000558731 SNRPAP09012 282 aaKnown RBP11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 TYK2P29597 1187 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 ACVRL1P37023 503 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 CD86P42081 329 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 AIF1P55008 147 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 MLLT6P55198 1093 aaPredicted RBP11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 PPIDQ08752 370 aaKnown RBP11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 NR1H3Q13133 447 aa11.02□□□□□ -0.64
CSPG4P5-201ENST00000558731 NAIF1Q69YI7 327 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms