RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CCNYQ8ND76 341 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 LRRN4CLQ8ND94 238 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 HTR3CQ8WXA8 447 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 ARHGEF2Q92974 986 aaKnown RBP15.24■□□□□ 0.03
VPS18-202ENST00000558474 RSPRY1Q96DX4 576 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 ZNF599Q96NL3 588 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 TMEM121Q9BTD3 319 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 LINC00597Q9H2U6 94 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 USP29Q9HBJ7 922 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 PCDH9Q9HC56 1237 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 KIAA1522Q9P206 1035 aaPredicted RBP15.24■□□□□ 0.03
VPS18-202ENST00000558474 NEU2Q9Y3R4 380 aa15.24■□□□□ 0.03
VPS18-202ENST00000558474 NYNRINQ9P2P1 1898 aaKnown RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 NUP205Q92621 2012 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 C5orf60A6NFR6 353 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 ZSCAN5CA6NGD5 496 aaPredicted RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 BHMG1C9JSJ3 638 aaPredicted RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 H3BQ06 376 aaPredicted RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 SGK1O00141 431 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 DFFAO00273 331 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 MATN3O15232 486 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 TTI1O43156 1089 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 MAFKO60675 156 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 GCATO75600 419 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 RBL1P28749 1068 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 PAPOLAP51003 745 aaKnown RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 PLK1P53350 603 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 IL10RBQ08334 325 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 AP1B1Q10567 949 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 NR1H3Q13133 447 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 DMC1Q14565 340 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 DHCR24Q15392 516 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 PPP1R7Q15435 360 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 SMAD2Q15796 467 aaKnown RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 CCDC85BQ15834 202 aaPredicted RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 CXorf57Q6NSI4 855 aaKnown RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 RHBDF2Q6PJF5 856 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 TPGS1Q6ZTW0 290 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 CIR1Q86X95 450 aaPredicted RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 TMEM25Q86YD3 366 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 YAF2Q8IY57 180 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 CARNMT1Q8N4J0 409 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 EIF1ADQ8N9N8 165 aaKnown RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 TTC16Q8NEE8 873 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 SEC14L1Q92503 715 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 CELF6Q96J87 481 aaKnown RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 XPO6Q96QU8 1125 aaKnown RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 LGMNQ99538 433 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 FAM118BQ9BPY3 351 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 ERP44Q9BS26 406 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 PHF7Q9BWX1 381 aaPredicted RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 BBS2Q9BXC9 721 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 ACE2Q9BYF1 805 aaPredicted RBP15.23■□□□□ 0.03
VPS18-202ENST00000558474 FAM129AQ9BZQ8 928 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 HAUS2Q9NVX0 235 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 TRHDEQ9UKU6 1024 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 HPCAL4Q9UM19 191 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 WNT6Q9Y6F9 365 aa15.23■□□□□ 0.03
VPS18-202ENST00000558474 KCNN4O15554 427 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 KDELR3O43731 214 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 KRT14P02533 472 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 TYRP14679 529 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 IFI35P80217 286 aaPredicted RBP15.22■□□□□ 0.03
VPS18-202ENST00000558474 TNK2Q07912 1038 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 HTR4Q13639 388 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 HNRNPDQ14103 355 aaKnown RBP15.22■□□□□ 0.03
VPS18-202ENST00000558474 RFTN1Q14699 578 aaPredicted RBP15.22■□□□□ 0.03
VPS18-202ENST00000558474 LY6G5CQ5SRR4 150 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 METTL3Q86U44 580 aaKnown RBP15.22■□□□□ 0.03
VPS18-202ENST00000558474 CPA6Q8N4T0 437 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.22■□□□□ 0.03
VPS18-202ENST00000558474 BBOF1Q8ND07 529 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 NSMCE1Q8WV22 266 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 MAML1Q92585 1016 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 ACDQ96AP0 544 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 HMCESQ96FZ2 354 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 P2RY11Q96G91 374 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 PAK5Q9P286 719 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 IPO11Q9UI26 975 aaKnown RBP15.22■□□□□ 0.03
VPS18-202ENST00000558474 FBXO10Q9UK96 956 aa15.22■□□□□ 0.03
VPS18-202ENST00000558474 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.21■□□□□ 0.03
VPS18-202ENST00000558474 NEDD8-MDP1E9PL57 170 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 SMAPO00193 183 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 SCAMP3O14828 347 aaKnown RBP15.21■□□□□ 0.03
VPS18-202ENST00000558474 CACNG3O60359 315 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 PRAMEF11O60813 436 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 OPHN1O60890 802 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 HEXIM1O94992 359 aaKnown RBP15.21■□□□□ 0.03
VPS18-202ENST00000558474 CYP17A1P05093 508 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 ADH5P11766 374 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 RENBPP51606 427 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 GEMIN4P57678 1058 aaKnown RBP15.21■□□□□ 0.03
VPS18-202ENST00000558474 ERCC6LQ2NKX8 1250 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 PREPLQ4J6C6 727 aaPredicted RBP15.21■□□□□ 0.03
VPS18-202ENST00000558474 RNF219Q5W0B1 726 aaPredicted RBP15.21■□□□□ 0.03
VPS18-202ENST00000558474 PARM1Q6UWI2 310 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 KIAA0907Q7Z7F0 614 aaPredicted RBP15.21■□□□□ 0.03
VPS18-202ENST00000558474 PCGF5Q86SE9 256 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 TP53INP2Q8IXH6 220 aa15.21■□□□□ 0.03
VPS18-202ENST00000558474 IFT20Q8IY31 132 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms