RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 THADAQ6YHU6 1953 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 PLXND1Q9Y4D7 1925 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 TMEM110-MUSTN1A8MSY1 372 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 TTC34A8MYJ7 566 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 EIF3CLB5ME19 914 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 PROB1E7EW31 1015 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 EEF2KO00418 725 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 RPP40O75818 363 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 PROSCO94903 275 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 LCA5LO95447 670 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 TCF4P15884 667 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 IL1R2P27930 398 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 HTR7P34969 479 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 NNMTP40261 264 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 MAGEA1P43355 309 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 GNA12Q03113 381 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 SIM2Q14190 667 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 HADHQ16836 314 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 USP39Q53GS9 565 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 BOLA3Q53S33 107 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 PPP6R3Q5H9R7 873 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 KCNT1Q5JUK3 1230 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 KIAA1324Q6UXG2 1013 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 ZNF783Q6ZMS7 281 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 PRR23BQ6ZRT6 265 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 CEP68Q76N32 757 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 PSTKQ8IV42 348 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 RHOT2Q8IXI1 618 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 RTL3Q8N8U3 475 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 DCAF4L2Q8NA75 395 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 KDM1BQ8NB78 822 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 OR7D4Q8NG98 312 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 GAB3Q8WWW8 586 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 RFFLQ8WZ73 363 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 HSPH1Q92598 858 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 PSMB7Q99436 277 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 EIF3CQ99613 913 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 SPON2Q9BUD6 331 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 C2orf49Q9BVC5 232 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 SLC6A17Q9H1V8 727 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 ATP13A1Q9HD20 1204 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 LUC7LQ9NQ29 371 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 NDFIP2Q9NV92 336 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 LCMT1Q9UIC8 334 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 SLCO3A1Q9UIG8 710 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 GON4LQ3T8J9 2241 aa12.67□□□□□ -0.38
SMAD3-205ENST00000558428 NYNRINQ9P2P1 1898 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 RIF1Q5UIP0 2472 aaKnown RBP12.67□□□□□ -0.38
SMAD3-205ENST00000558428 GPR179Q6PRD1 2367 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 FGF10O15520 208 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 DAPK3O43293 454 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 SNAP91O60641 907 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 RAMP2O60895 175 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 NDUFA10O95299 355 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 IPO7O95373 1038 aaKnown RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 LMNAP02545 664 aaKnown RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 GJC1P36383 396 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 ETFBP38117 255 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 SLC25A11Q02978 314 aaKnown RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 CAMK2GQ13555 558 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 MESDQ14696 234 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 HNRNPA1L2Q32P51 320 aaKnown RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 IL31Q6EBC2 164 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 TMPRSS6Q8IU80 811 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 OR2T3Q8NH03 318 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 RLN3Q8WXF3 142 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 MRGPRX1Q96LB2 322 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 BAG1Q99933 345 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 MKRN2Q9H000 416 aaKnown RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 EPC1Q9H2F5 836 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 MTG2Q9H4K7 406 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 PRSS16Q9NQE7 514 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 VPS51Q9UID3 782 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 RAB23Q9ULC3 237 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 SMG5Q9UPR3 1016 aaKnown RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 INVSQ9Y283 1065 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 PCDHA13Q9Y5I0 950 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 EPN1Q9Y6I3 576 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 FAM186AA6NE01 2351 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 ZFHX2Q9C0A1 2572 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-205ENST00000558428 RALGAPA1Q6GYQ0 2036 aa12.66□□□□□ -0.38
SMAD3-205ENST00000558428 CEP192Q8TEP8 1941 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 EDDM13A0A1B0GTR0 161 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 WASH4PA8MWX3 477 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 CBX4O00257 560 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 DCLK1O15075 740 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 SIN3BO75182 1162 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 MTA2O94776 668 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 RARAP10276 462 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 GOT1P17174 413 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 GLDCP23378 1020 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 ACVRL1P37023 503 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 ARL4AP40617 200 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 P2RY2P41231 377 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 ZNF135P52742 658 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-205ENST00000558428 COPAP53621 1224 aa12.65□□□□□ -0.38
SMAD3-205ENST00000558428 BYSLQ13895 437 aaKnown RBP12.65□□□□□ -0.38
SMAD3-205ENST00000558428 POLD3Q15054 466 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-205ENST00000558428 DPYSL2Q16555 572 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms