RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SKIP12755 728 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 CCNB1P14635 433 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 SERPINB9P50453 376 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 ZBTB16Q05516 673 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 DSC1Q08554 894 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 EFEMP1Q12805 493 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 CBLBQ13191 982 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 CTXN3Q4LDR2 81 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 KCTD11Q693B1 232 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 CIR1Q86X95 450 aaPredicted RBP10.78□□□□□ -0.68
TPM1-210ENST00000558264 PNPLA1Q8N8W4 532 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM1-210ENST00000558264 PPP1R14CQ8TAE6 165 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 ZSCAN18Q8TBC5 510 aaPredicted RBP10.78□□□□□ -0.68
TPM1-210ENST00000558264 URGCPQ8TCY9 931 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 C20orf96Q9NUD7 363 aaPredicted RBP10.78□□□□□ -0.68
TPM1-210ENST00000558264 ARHGEF38Q9NXL2 777 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 ZCWPW2A0A1B0GU75 182 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 E9PAM4 449 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 C2CD2LO14523 706 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 NCAM2O15394 837 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 PMPCBO75439 489 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 DLDP09622 509 aaKnown RBP10.78□□□□□ -0.68
TPM1-210ENST00000558264 TYMPP19971 482 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 TYK2P29597 1187 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 IRF9Q00978 393 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 NOGQ13253 232 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 PSMD5Q16401 504 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 PCSK7Q16549 785 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 ANKRD20A4Q4UJ75 823 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 FASTKD1Q53R41 847 aaKnown RBP10.78□□□□□ -0.68
TPM1-210ENST00000558264 MAP3K21Q5TCX8 1036 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 ASRGL1Q7L266 308 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 CLNKQ7Z7G1 428 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 ZNF354CQ86Y25 554 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 TNS4Q8IZW8 715 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 DCLK2Q8N568 766 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 DBF4BQ8NFT6 615 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 UTP4Q969X6 686 aaKnown RBP10.78□□□□□ -0.68
TPM1-210ENST00000558264 MOCOSQ96EN8 888 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 SEPT5Q99719 369 aaPredicted RBP10.78□□□□□ -0.68
TPM1-210ENST00000558264 CRISPLD1Q9H336 500 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 SMOC2Q9H3U7 446 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 LRRC40Q9H9A6 602 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 CASS4Q9NQ75 786 aa10.78□□□□□ -0.68
TPM1-210ENST00000558264 IARS2Q9NSE4 1012 aaKnown RBP10.78□□□□□ -0.68
TPM1-210ENST00000558264 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.77□□□□□ -0.69
TPM1-210ENST00000558264 ITM2AO43736 263 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 MGRN1O60291 552 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 MAFKO60675 156 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 RPLP2P05387 115 aaKnown RBP10.77□□□□□ -0.69
TPM1-210ENST00000558264 CPB1P15086 417 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 CRHR1P34998 444 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 CHRNA4P43681 627 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 TCTN1Q2MV58 587 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 PIK3R6Q5UE93 754 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 LHX8Q68G74 356 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 ITPRIPL1Q6GPH6 555 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 TMEM173Q86WV6 379 aaPredicted RBP10.77□□□□□ -0.69
TPM1-210ENST00000558264 ABI1Q8IZP0 508 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 PLD6Q8N2A8 252 aaKnown RBP10.77□□□□□ -0.69
TPM1-210ENST00000558264 FICDQ9BVA6 458 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 UNKQ9C0B0 810 aaKnown RBP10.77□□□□□ -0.69
TPM1-210ENST00000558264 ZCWPW1Q9H0M4 648 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 PRDM16Q9HAZ2 1276 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 NOD2Q9HC29 1040 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 ARHGEF3Q9NR81 526 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 TMEM216Q9P0N5 145 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 MTO1Q9Y2Z2 717 aaKnown RBP10.77□□□□□ -0.69
TPM1-210ENST00000558264 PTPRDP23468 1912 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 CFAP73A6NFT4 308 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 NBNO60934 754 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 CNTN5O94779 1100 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 HLA-DQB2P05538 268 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 BPGMP07738 259 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 CPA2P48052 419 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 PAPOLAP51003 745 aaKnown RBP10.77□□□□□ -0.69
TPM1-210ENST00000558264 MAXP61244 160 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 CCDC15Q0P6D6 951 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 EIF4EBP2Q13542 120 aaPredicted RBP10.77□□□□□ -0.69
TPM1-210ENST00000558264 SPANXN3Q5MJ09 141 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 RSPO2Q6UXX9 243 aaPredicted RBP10.77□□□□□ -0.69
TPM1-210ENST00000558264 LRRC8DQ7L1W4 858 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 KCNMB4Q86W47 210 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 KLHL5Q96PQ7 755 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 OSBPL2Q9H1P3 480 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 SNX15Q9NRS6 342 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 TXLNGQ9NUQ3 528 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 ARL8BQ9NVJ2 186 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 L3MBTL1Q9Y468 752 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 MYO16Q9Y6X6 1858 aa10.77□□□□□ -0.69
TPM1-210ENST00000558264 VGLL3A8MV65 326 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 GSRP00390 522 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 AVPR1AP37288 418 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 GP5P40197 560 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 SLC20A2Q08357 652 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 MGAT5BQ3V5L5 792 aa10.76□□□□□ -0.69
TPM1-210ENST00000558264 HSF5Q4G112 596 aaPredicted RBP10.76□□□□□ -0.69
TPM1-210ENST00000558264 ARTNQ5T4W7 220 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms