RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 PLK1P53350 603 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 CDH4P55283 916 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 JAM2P57087 298 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 NOMO3P69849 1222 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 ECT2LQ008S8 904 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 RELBQ01201 579 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 DEUP1Q05D60 604 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 CCDC15Q0P6D6 951 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 HNRNPDQ14103 355 aaKnown RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 HNRNPA1L2Q32P51 320 aaKnown RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 PLEKHG6Q3KR16 790 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 OXLD1Q5BKU9 147 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 PITRM1Q5JRX3 1037 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 TMEM215Q68D42 235 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 DPY19L2P1Q6NXN4 242 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 USP30Q70CQ3 517 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 NOP9Q86U38 636 aaKnown RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 HDDC3Q8N4P3 179 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 NT5C3BQ969T7 300 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 TOE1Q96GM8 510 aaKnown RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 C1orf74Q96LT6 269 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 CCDC114Q96M63 670 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 HSPA12BQ96MM6 686 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 NPY6RQ99463 290 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 MKRN2Q9H000 416 aaKnown RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 BTBD1Q9H0C5 482 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 ZNF395Q9H8N7 513 aaPredicted RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 SGK2Q9HBY8 427 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 WSB2Q9NYS7 404 aaPredicted RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 COX16Q9P0S2 106 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 SLC25A13Q9UJS0 675 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 AJAP1Q9UKB5 411 aaPredicted RBP11.76□□□□□ -0.53
LINC00648-204ENST00000557749 ITIH6Q6UXX5 1313 aa11.76□□□□□ -0.53
LINC00648-204ENST00000557749 A0A1B0GTW7 788 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 ANTXRLA6NF34 631 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 WASH3PC4AMC7 463 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 SPINT1O43278 529 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 PAGE1O75459 146 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 GRAP2O75791 330 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 CYP1A1P04798 512 aaPredicted RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 CFIP05156 583 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 FERP16591 822 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 MMP8P22894 467 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 SDC4P31431 198 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 ETFBP38117 255 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 PTGER3P43115 390 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 PTGIRP43119 386 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 CXCR3P49682 368 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 SGSHP51688 502 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 COPAP53621 1224 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 GSCP56915 257 aaPredicted RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 RNASE9P60153 205 aaKnown RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 KRT83P78385 493 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 AUHQ13825 339 aaKnown RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 ELAVL3Q14576 367 aaKnown RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 TAF5Q15542 800 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 CCDC6Q16204 474 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 PPM1JQ5JR12 505 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 C6orf118Q5T5N4 469 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 NAA35Q5VZE5 725 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 IL27RAQ6UWB1 636 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 ZNF783Q6ZMS7 281 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 ARMCX6Q7L4S7 300 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 SETD3Q86TU7 594 aaPredicted RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 XYLT1Q86Y38 959 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 CCAR2Q8N163 923 aaKnown RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 CYB5D2Q8WUJ1 264 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 SORCS1Q8WY21 1168 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 DNASE2BQ8WZ79 361 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 SKA1Q96BD8 255 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 P2RY11Q96G91 374 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 HAPLN3Q96S86 360 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 PRMT1Q99873 361 aaKnown RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 C2orf49Q9BVC5 232 aaPredicted RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 TKTL2Q9H0I9 626 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 RSPH9Q9H1X1 276 aaPredicted RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 SLC32A1Q9H598 525 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 NLRC4Q9NPP4 1024 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 ARHGEF38Q9NXL2 777 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 NOCTQ9UK39 431 aaKnown RBP11.75□□□□□ -0.53
LINC00648-204ENST00000557749 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
LINC00648-204ENST00000557749 CXorf51AA0A1B0GTR3 108 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 MMEP08473 750 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 CSRP1P21291 193 aaKnown RBP11.74□□□□□ -0.53
LINC00648-204ENST00000557749 ITPKAP23677 461 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 ZNF165P49910 485 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 CENPCQ03188 943 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 SLC14A1Q13336 389 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 TEAD4Q15561 434 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 C5orf22Q49AR2 442 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 ANO6Q4KMQ2 910 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 FAM46CQ5VWP2 391 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 FBXL22Q6P050 247 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 CFAP52Q8N1V2 620 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 AOPEPQ8N6M6 819 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 IQCDQ96DY2 449 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 LMLNQ96KR4 655 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 GPR174Q9BXC1 333 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms