RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SEC13P55735 322 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 SFSWAPQ12872 951 aaKnown RBP14.03□□□□□ -0.16
SHMT2-234ENST00000557703 KRT81Q14533 505 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 ZNF234Q14588 700 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 POLD3Q15054 466 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-234ENST00000557703 ANGPT1Q15389 498 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 FUT11Q495W5 492 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 ODF2Q5BJF6 829 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 PPP6R3Q5H9R7 873 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-234ENST00000557703 EGFLAMQ63HQ2 1017 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 SERPINA13PQ6UXR4 307 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 TFAP2DQ7Z6R9 452 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 DAAM2Q86T65 1068 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 C11orf74Q86VG3 221 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 PYROXD2Q8N2H3 581 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 ALLCQ8N6M5 410 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 TXNDC5Q8NBS9 432 aaKnown RBP14.03□□□□□ -0.16
SHMT2-234ENST00000557703 KCTD6Q8NC69 237 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 KIAA1524Q8TCG1 905 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 ACE2Q9BYF1 805 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-234ENST00000557703 CWC15Q9P013 229 aaKnown RBP14.03□□□□□ -0.16
SHMT2-234ENST00000557703 ERVW-1Q9UQF0 538 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 PCDHGA2Q9Y5H1 932 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 STON1Q9Y6Q2 735 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 KMT2EQ8IZD2 1858 aa14.03□□□□□ -0.16
SHMT2-234ENST00000557703 ARHGAP42A6NI28 874 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 ATP9BO43861 1147 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 BUB1BO60566 1050 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 ADAM23O75077 832 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 HOXB2P14652 356 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 ZFXP17010 805 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 ERCC2P18074 760 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 MZF1P28698 734 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 GGCXP38435 758 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 ARSEP51690 589 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 NAP1L1P55209 391 aaKnown RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 CDH6P55285 790 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 ZBTB16Q05516 673 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 CAMK2GQ13555 558 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 DPYSQ14117 519 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 PTPRNQ16849 979 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 HNRNPA1L2Q32P51 320 aaKnown RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 FNDC3BQ53EP0 1204 aaKnown RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 INO80DQ53TQ3 878 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 KCNT1Q5JUK3 1230 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 EMC10Q5UCC4 262 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 RASSF3Q86WH2 238 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 CIR1Q86X95 450 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 ACRBPQ8NEB7 543 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 TSTD1Q8NFU3 115 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 TSC1Q92574 1164 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 HSPH1Q92598 858 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 ISG20Q96AZ6 181 aaKnown RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 FAF2Q96CS3 445 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 CCDC114Q96M63 670 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 CSPG4P5Q96PW8 444 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 KCTD15Q96SI1 283 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 CEP44Q9C0F1 390 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 LACRTQ9GZZ8 138 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 PCDH18Q9HCL0 1135 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 ZSCAN32Q9NX65 697 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 SCML1Q9UN30 329 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 FARP1Q9Y4F1 1045 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-234ENST00000557703 SNX10Q9Y5X0 201 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 RAD54BQ9Y620 910 aa14.02□□□□□ -0.17
SHMT2-234ENST00000557703 EDDM13A0A1B0GTR0 161 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 CCDC66A2RUB6 948 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 MIF4GDA9UHW6 222 aaKnown RBP14.01□□□□□ -0.17
SHMT2-234ENST00000557703 K7ESF4 209 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 SGK1O00141 431 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 ALOX15BO15296 676 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 KDELR3O43731 214 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 ZNF217O75362 1048 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 PTMAP06454 111 aaKnown RBP14.01□□□□□ -0.17
SHMT2-234ENST00000557703 TDGF1P13385 188 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 GOT1P17174 413 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 COMTP21964 271 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 KDELR1P24390 212 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 CETN2P41208 172 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 IRAK1P51617 712 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 COPS2P61201 443 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 CCZ1BP86790 482 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 CCZ1P86791 482 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-234ENST00000557703 SATB1Q01826 763 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 CSTF1Q05048 431 aaKnown RBP14.01□□□□□ -0.17
SHMT2-234ENST00000557703 CA9Q16790 459 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 SMTNL2Q2TAL5 461 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 AFMIDQ63HM1 303 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 TMCO3Q6UWJ1 677 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 WDR5BQ86VZ2 330 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 LONP2Q86WA8 852 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 RCOR2Q8IZ40 523 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 MAML2Q8IZL2 1156 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-234ENST00000557703 APCDD1Q8J025 514 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 ZBTB44Q8NCP5 570 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 ARHGEF2Q92974 986 aaKnown RBP14.01□□□□□ -0.17
SHMT2-234ENST00000557703 ATP13A1Q9HD20 1204 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 HCN2Q9UL51 889 aa14.01□□□□□ -0.17
SHMT2-234ENST00000557703 EFR3BQ9Y2G0 817 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms