RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ERLEC1Q96DZ1 483 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 IPO9Q96P70 1041 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 ARID3AQ99856 593 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 DDX50Q9BQ39 737 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 GTPBP4Q9BZE4 634 aaKnown RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 GSX2Q9BZM3 304 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 ULBP1Q9BZM6 244 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 C6orf106Q9H6K1 298 aaPredicted RBP9.01□□□□□ -0.97
VRK1-206ENST00000557222 IL21RQ9HBE5 538 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 TM9SF3Q9HD45 589 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 PRSS16Q9NQE7 514 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 CNGB3Q9NQW8 809 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 HESX1Q9UBX0 185 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 GGA2Q9UJY4 613 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 NCKAP1Q9Y2A7 1128 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 ANKRD6Q9Y2G4 727 aa9.01□□□□□ -0.97
VRK1-206ENST00000557222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9□□□□□ -0.97
VRK1-206ENST00000557222 A0A1W2PQ27 194 aa9□□□□□ -0.97
VRK1-206ENST00000557222 A0A1W2PQ64 194 aa9□□□□□ -0.97
VRK1-206ENST00000557222 PMM2O15305 246 aa9□□□□□ -0.97
VRK1-206ENST00000557222 SLC16A3O15427 465 aaKnown RBP9□□□□□ -0.97
VRK1-206ENST00000557222 YKT6O15498 198 aa9□□□□□ -0.97
VRK1-206ENST00000557222 IGLV3-27P01718 113 aa9□□□□□ -0.97
VRK1-206ENST00000557222 ASLP04424 464 aa9□□□□□ -0.97
VRK1-206ENST00000557222 C1SP09871 688 aa9□□□□□ -0.97
VRK1-206ENST00000557222 ATXN1LP0C7T5 689 aaKnown RBP9□□□□□ -0.97
VRK1-206ENST00000557222 VDRP11473 427 aa9□□□□□ -0.97
VRK1-206ENST00000557222 POLR2EP19388 210 aaKnown RBP9□□□□□ -0.97
VRK1-206ENST00000557222 TBXAS1P24557 533 aaPredicted RBP9□□□□□ -0.97
VRK1-206ENST00000557222 CTSKP43235 329 aa9□□□□□ -0.97
VRK1-206ENST00000557222 SLC11A2P49281 568 aa9□□□□□ -0.97
VRK1-206ENST00000557222 CCT8P50990 548 aa9□□□□□ -0.97
VRK1-206ENST00000557222 RPS14P62263 151 aaKnown RBP9□□□□□ -0.97
VRK1-206ENST00000557222 RACK1P63244 317 aaKnown RBP9□□□□□ -0.97
VRK1-206ENST00000557222 KRT85P78386 507 aa9□□□□□ -0.97
VRK1-206ENST00000557222 CUL2Q13617 745 aa9□□□□□ -0.97
VRK1-206ENST00000557222 STILQ15468 1287 aa9□□□□□ -0.97
VRK1-206ENST00000557222 SMAD1Q15797 465 aaKnown RBP9□□□□□ -0.97
VRK1-206ENST00000557222 SWI5Q1ZZU3 235 aa9□□□□□ -0.97
VRK1-206ENST00000557222 COBLL1Q53SF7 1204 aa9□□□□□ -0.97
VRK1-206ENST00000557222 PIK3R6Q5UE93 754 aa9□□□□□ -0.97
VRK1-206ENST00000557222 NUGGCQ68CJ6 796 aa9□□□□□ -0.97
VRK1-206ENST00000557222 MBLAC2Q68D91 279 aa9□□□□□ -0.97
VRK1-206ENST00000557222 ZNF776Q68DI1 518 aaPredicted RBP9□□□□□ -0.97
VRK1-206ENST00000557222 KRBA2Q6ZNG9 492 aa9□□□□□ -0.97
VRK1-206ENST00000557222 TMPRSS12Q86WS5 348 aa9□□□□□ -0.97
VRK1-206ENST00000557222 SIX6OS1Q8N1H7 587 aa9□□□□□ -0.97
VRK1-206ENST00000557222 TTC17Q96AE7 1141 aa9□□□□□ -0.97
VRK1-206ENST00000557222 BIRC7Q96CA5 298 aa9□□□□□ -0.97
VRK1-206ENST00000557222 MYO19Q96H55 970 aa9□□□□□ -0.97
VRK1-206ENST00000557222 SPATA32Q96LK8 384 aa9□□□□□ -0.97
VRK1-206ENST00000557222 RSPH9Q9H1X1 276 aaPredicted RBP9□□□□□ -0.97
VRK1-206ENST00000557222 MMRN2Q9H8L6 949 aa9□□□□□ -0.97
VRK1-206ENST00000557222 ABCB8Q9NUT2 735 aa9□□□□□ -0.97
VRK1-206ENST00000557222 TSPAN16Q9UKR8 245 aa9□□□□□ -0.97
VRK1-206ENST00000557222 PCDHGA1Q9Y5H4 931 aa9□□□□□ -0.97
VRK1-206ENST00000557222 SNX11Q9Y5W9 270 aa9□□□□□ -0.97
VRK1-206ENST00000557222 A0A087WV48 116 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 TARSL2A2RTX5 802 aaKnown RBP8.99□□□□□ -0.97
VRK1-206ENST00000557222 YJEFN3A6XGL0 299 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 C10orf142B7Z368 130 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 E7ENQ6 273 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 M0R082 166 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 VILLO15195 856 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 RNASEH1O60930 286 aaKnown RBP8.99□□□□□ -0.97
VRK1-206ENST00000557222 FBXO21O94952 628 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 ALBP02768 609 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 PAEPP09466 180 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 HLA-EP13747 358 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
VRK1-206ENST00000557222 IDH3AP50213 366 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 NDUFA8P51970 172 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 DAOAP59103 153 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 ST8SIA6P61647 398 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 ADIGQ0VDE8 80 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 GOLGA7BQ2TAP0 167 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 COL28A1Q2UY09 1125 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 SOWAHCQ53LP3 525 aaPredicted RBP8.99□□□□□ -0.97
VRK1-206ENST00000557222 KIAA0895LQ68EN5 471 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 LCLAT1Q6UWP7 414 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 BEND5Q7L4P6 421 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 FAM124AQ86V42 546 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 ZC3H3Q8IXZ2 948 aaKnown RBP8.99□□□□□ -0.97
VRK1-206ENST00000557222 FIBINQ8TAL6 211 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 ZNF417Q8TAU3 575 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 CYB5D2Q8WUJ1 264 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 SLC35F5Q8WV83 523 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 SNX19Q92543 992 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 LMLNQ96KR4 655 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 HSFY1Q96LI6 401 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 ZNF587Q96SQ5 575 aaPredicted RBP8.99□□□□□ -0.97
VRK1-206ENST00000557222 ORAI3Q9BRQ5 295 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 ACE2Q9BYF1 805 aaPredicted RBP8.99□□□□□ -0.97
VRK1-206ENST00000557222 SCAND2PQ9GZW5 306 aaPredicted RBP8.99□□□□□ -0.97
VRK1-206ENST00000557222 RMND1Q9NWS8 449 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 ADAMTS1Q9UHI8 967 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 SFMBT1Q9UHJ3 866 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 MAPK8IP1Q9UQF2 711 aa8.99□□□□□ -0.97
VRK1-206ENST00000557222 A0A1B0GTQ1 180 aa8.98□□□□□ -0.97
VRK1-206ENST00000557222 A0A1W2PPC4 97 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms