RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 CCDC40Q4G0X9 1142 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 RAB41Q5JT25 222 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 PM20D1Q6GTS8 502 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 SCD5Q86SK9 330 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 TMEM25Q86YD3 366 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 BBS7Q8IWZ6 715 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 TRIML1Q8N9V2 468 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 ELOA3Q8NG57 546 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 COG1Q8WTW3 980 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 NELFBQ8WX92 580 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 JAKMIP2Q96AA8 810 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 RMDN1Q96DB5 314 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 MAGEB10Q96LZ2 347 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 FBRSQ9HAH7 460 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 DLL3Q9NYJ7 618 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 WHRNQ9P202 907 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 WDR35Q9P2L0 1181 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 DEC1Q9P2X7 70 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 LSM7Q9UK45 103 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 MMP17Q9ULZ9 603 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 ZNF510Q9Y2H8 683 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 ZNF292O60281 2723 aa10.28□□□□□ -0.76
HNRNPC-228ENST00000557033 LOC100289279A0A1B0GTE1 492 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 TCRBV16S1A1N1A0A5B0 115 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 XPO1O14980 1071 aaKnown RBP10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 DLGAP3O95886 979 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 PAEPP09466 180 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 CCDC192P0DO97 292 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 PXNP49023 591 aaPredicted RBP10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 DGKEP52429 567 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 UBE2HP62256 183 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 CRY1Q16526 586 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 CSRP2Q16527 193 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 LPAL2Q16609 132 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 NKG7Q16617 165 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 ANO4Q32M45 955 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 GFOD2Q3B7J2 385 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 SGO2Q562F6 1265 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 C10orf120Q5SQS8 335 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 KLHL10Q6JEL2 608 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 UBE2R2Q712K3 238 aaPredicted RBP10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 C11orf74Q86VG3 221 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 RASSF3Q86WH2 238 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 VWA5B2Q8N398 1253 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 ARHGEF39Q8N4T4 335 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 SVIPQ8NHG7 77 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 XPO6Q96QU8 1125 aaKnown RBP10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 PARD6AQ9NPB6 346 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 ENAMQ9NRM1 1142 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 CHMP5Q9NZZ3 219 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 HESX1Q9UBX0 185 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 USP18Q9UMW8 372 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 STARD13Q9Y3M8 1113 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 MYO16Q9Y6X6 1858 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 ATG2BQ96BY7 2078 aa10.27□□□□□ -0.77
HNRNPC-228ENST00000557033 KIAA1549LQ6ZVL6 1849 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 WDR87Q6ZQQ6 2873 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 BLACEA4D250 179 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 TBC1D3BA6NDS4 549 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 TULP3O75386 442 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 ALDH1A2O94788 518 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 RHOBTB1O94844 696 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 FBXO21O94952 628 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 ZBED1O96006 694 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 IRF1P10914 325 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 PYGMP11217 842 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 HOXC13P31276 330 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 CHKAP35790 457 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 KIR2DL1P43626 348 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 TKTL1P51854 596 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 BCAT1P54687 386 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 YWHAGP61981 247 aaKnown RBP eCLIP10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 ID3Q02535 119 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 BST2Q10589 180 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 LRMPQ12912 555 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 PAK1Q13153 545 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 STILQ15468 1287 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 RSPO4Q2I0M5 234 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 USP39Q53GS9 565 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 EOGTQ5NDL2 527 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 C20orf204Q6ZNR8 217 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 TRMT11Q7Z4G4 463 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 TTC30AQ86WT1 665 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 NAT16Q8N8M0 369 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 TSTD1Q8NFU3 115 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 OR2W6PQ8NHA6 318 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 LMO3Q8TAP4 145 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 BTN2A2Q8WVV5 523 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 JPH3Q8WXH2 748 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 KCTD13Q8WZ19 329 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 WBP2Q969T9 261 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 CNOT6LQ96LI5 555 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 NT5C1BQ96P26 610 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 ORAI3Q9BRQ5 295 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 BBS2Q9BXC9 721 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 DCLK3Q9C098 648 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 LRRC4Q9HBW1 653 aa10.26□□□□□ -0.77
HNRNPC-228ENST00000557033 SEMA4GQ9NTN9 838 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms