RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 GNL1P36915 607 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-245ENST00000556958 COPB1P53618 953 aaKnown RBP5.98□□□□□ -1.45
ATXN3-245ENST00000556958 EVCP57679 992 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 MC1RQ01726 317 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 MAPK7Q13164 816 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 POSTNQ15063 836 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 TLR1Q15399 786 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 SETMARQ53H47 684 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-245ENST00000556958 MDH1BQ5I0G3 518 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 EARS2Q5JPH6 523 aaKnown RBP5.98□□□□□ -1.45
ATXN3-245ENST00000556958 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 TMEM215Q68D42 235 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 ADALQ6DHV7 355 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 KLHDC10Q6PID8 442 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 BLOC1S2Q6QNY1 142 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 CRTC1Q6UUV9 634 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 ASB18Q6ZVZ8 466 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 SCAMP5Q8TAC9 235 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 CYB5D2Q8WUJ1 264 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 KCNN1Q92952 543 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 USP7Q93009 1102 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 GTPBP3Q969Y2 492 aaKnown RBP5.98□□□□□ -1.45
ATXN3-245ENST00000556958 C5orf34Q96MH7 638 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 AIFM3Q96NN9 605 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 GFM1Q96RP9 751 aaKnown RBP5.98□□□□□ -1.45
ATXN3-245ENST00000556958 CMKLR1Q99788 373 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 EFHD1Q9BUP0 239 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 SLC29A3Q9BZD2 475 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 SNX25Q9H3E2 840 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 PREBQ9HCU5 417 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 IL37Q9NZH6 218 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 AKAP7Q9P0M2 348 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-245ENST00000556958 ARHGAP20Q9P2F6 1191 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 SERGEFQ9UGK8 458 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 SLC5A6Q9Y289 635 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 LOXL2Q9Y4K0 774 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 BSNQ9UPA5 3926 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 ATP8B3O60423 1300 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 PDZD2O15018 2839 aa5.98□□□□□ -1.45
ATXN3-245ENST00000556958 ANKHD1Q8IWZ3 2542 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 FAM92AA1XBS5 289 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 TARSL2A2RTX5 802 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 HCRTO43612 131 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 JAK2O60674 1132 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 NEBLO76041 1014 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 RHOQP17081 205 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 POLR2EP19388 210 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 WARSP23381 471 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 MAT2AP31153 395 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 CCKBRP32239 447 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 SLC5A3P53794 718 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 ADPRHP54922 357 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 CENPCQ03188 943 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 MPPE1Q53F39 396 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 TBCELQ5QJ74 424 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 ARTNQ5T4W7 220 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 SP5Q6BEB4 398 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 ESRP1Q6NXG1 681 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 LINC00114Q6XXX2 140 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 CHST9Q7L1S5 443 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 MMAAQ8IVH4 418 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 TP53INP2Q8IXH6 220 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 CCDC13Q8IYE1 715 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 AHI1Q8N157 1196 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 C1orf127Q8N9H9 656 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 WASF1Q92558 559 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 NKD1Q969G9 470 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 CCDC3Q9BQI4 270 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 RUSC1Q9BVN2 902 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 CALN1Q9BXU9 219 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 AGXT2Q9BYV1 514 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 RAB34Q9BZG1 259 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 UNKQ9C0B0 810 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 INTS2Q9H0H0 1204 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 TMEM60Q9H2L4 133 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 ZFP64Q9NPA5 681 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 LATS2Q9NRM7 1088 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 DNAJC28Q9NX36 388 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 KCND2Q9NZV8 630 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 CYTH4Q9UIA0 394 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 AGO2Q9UKV8 859 aaKnown RBP5.97□□□□□ -1.45
ATXN3-245ENST00000556958 PPM1HQ9ULR3 514 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 PADI4Q9UM07 663 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 TP53TG5Q9Y2B4 290 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 ARID2Q68CP9 1835 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 CCDC168Q8NDH2 2452 aa5.97□□□□□ -1.45
ATXN3-245ENST00000556958 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 CRYBG3Q68DQ2 2970 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 MYO18AQ92614 2054 aaKnown RBP5.96□□□□□ -1.46
ATXN3-245ENST00000556958 A6NJY4 79 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 E9PMD0 336 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 SLC7A4O43246 635 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 AQP9O43315 295 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 TACC1O75410 805 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 STC2O76061 302 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 HGFP14210 728 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 PSMA5P28066 241 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 AKT2P31751 481 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 MCM7P33993 719 aa5.96□□□□□ -1.46
ATXN3-245ENST00000556958 PDX1P52945 283 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms