RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 TMPRSS4Q9NRS4 437 aa16.86■□□□□ 0.29
PCNX4-213ENST00000556907 RCOR3Q9P2K3 495 aaPredicted RBP16.86■□□□□ 0.29
PCNX4-213ENST00000556907 GGA2Q9UJY4 613 aa16.86■□□□□ 0.29
PCNX4-213ENST00000556907 EFR3BQ9Y2G0 817 aa16.86■□□□□ 0.29
PCNX4-213ENST00000556907 WASH4PA8MWX3 477 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 CHURC1-FNTBB4DL54 471 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 FGGP02679 453 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 ATP5BP06576 529 aaKnown RBP16.85■□□□□ 0.29
PCNX4-213ENST00000556907 AVPR2P30518 371 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 ETFBP38117 255 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 PLK1P53350 603 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 CDH6P55285 790 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 KDSRQ06136 332 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 DPYSL3Q14195 570 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 TFDP3Q5H9I0 405 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 ZFYVE27Q5T4F4 411 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 NAIF1Q69YI7 327 aaPredicted RBP16.85■□□□□ 0.29
PCNX4-213ENST00000556907 MAP7D3Q8IWC1 876 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 MAIP1Q8WWC4 291 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 TSC1Q92574 1164 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 ACDQ96AP0 544 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 RNF25Q96BH1 459 aaPredicted RBP16.85■□□□□ 0.29
PCNX4-213ENST00000556907 FAF2Q96CS3 445 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 LMLNQ96KR4 655 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 KCTD15Q96SI1 283 aaPredicted RBP16.85■□□□□ 0.29
PCNX4-213ENST00000556907 OSBPL8Q9BZF1 889 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 ABCB8Q9NUT2 735 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 TMEM248Q9NWD8 314 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 GPATCH2LQ9NWQ4 482 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 ELOVL2Q9NXB9 296 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 SMARCAL1Q9NZC9 954 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 DLGAP2Q9P1A6 1054 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 CLEC4EQ9ULY5 219 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 SNX10Q9Y5X0 201 aa16.85■□□□□ 0.29
PCNX4-213ENST00000556907 CXorf51AA0A1B0GTR3 108 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 ILVBLA1L0T0 632 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 CTAGE15A4D2H0 777 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 ASLP04424 464 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 CTAGE8P0CG41 777 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 HNRNPLP14866 589 aaKnown RBP eCLIP16.84■□□□□ 0.293e-9■□□□□ 9.7
PCNX4-213ENST00000556907 EPHB2P29323 1055 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 OR1E1P30953 314 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 GGCXP38435 758 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 ARL4AP40617 200 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 TPI1P60174 286 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 SULT2A1Q06520 285 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 KLF1Q13351 362 aaPredicted RBP16.84■□□□□ 0.29
PCNX4-213ENST00000556907 KRT81Q14533 505 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 CA9Q16790 459 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 GEN1Q17RS7 908 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 LONRF2Q1L5Z9 754 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 ARTNQ5T4W7 220 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 RWDD4Q6NW29 188 aaKnown RBP16.84■□□□□ 0.29
PCNX4-213ENST00000556907 CTAGE6Q86UF2 777 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 CTAGE4Q8IX94 777 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 SPEM1Q8N4L4 309 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 KCTD6Q8NC69 237 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 TTC17Q96AE7 1141 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 PRRX2Q99811 253 aa16.84■□□□□ 0.29
PCNX4-213ENST00000556907 FAM86C2PA6NEL3 165 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 FAM72CH0Y354 149 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 H3BRJ5 948 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 CCDC188H7C350 402 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 EEF2KO00418 725 aaKnown RBP16.83■□□□□ 0.28
PCNX4-213ENST00000556907 TRIM24O15164 1050 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 PI15O43692 258 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 CREB3O43889 395 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 RNF40O75150 1001 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 CNTN5O94779 1100 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 DCNP07585 359 aaKnown RBP16.83■□□□□ 0.28
PCNX4-213ENST00000556907 CD48P09326 243 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 POLR2EP19388 210 aaKnown RBP16.83■□□□□ 0.28
PCNX4-213ENST00000556907 KIR2DL1P43626 348 aaPredicted RBP16.83■□□□□ 0.28
PCNX4-213ENST00000556907 LMAN2Q12907 356 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 SIX1Q15475 284 aaPredicted RBP16.83■□□□□ 0.28
PCNX4-213ENST00000556907 ALFQ53S48 1182 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 FAM72AQ5TYM5 149 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 SDE2Q6IQ49 451 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 FAM72DQ6L9T8 149 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 CXorf57Q6NSI4 855 aaKnown RBP16.83■□□□□ 0.28
PCNX4-213ENST00000556907 ADIPOR2Q86V24 386 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 NLRP14Q86W24 1093 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 FAM72BQ86X60 149 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 PYROXD2Q8N2H3 581 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 RTL3Q8N8U3 475 aaKnown RBP16.83■□□□□ 0.28
PCNX4-213ENST00000556907 KDM1BQ8NB78 822 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 USP33Q8TEY7 942 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 EZH1Q92800 747 aaPredicted RBP16.83■□□□□ 0.28
PCNX4-213ENST00000556907 HERPUD2Q9BSE4 406 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 LRFN3Q9BTN0 628 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 ZDBF2Q9HCK1 2354 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 MPP6Q9NZW5 540 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 PLA2G4CQ9UP65 541 aa16.83■□□□□ 0.28
PCNX4-213ENST00000556907 GOLGA6L10A0A0M3HER8 536 aa16.82■□□□□ 0.28
PCNX4-213ENST00000556907 PRRT4C9JH25 899 aa16.82■□□□□ 0.28
PCNX4-213ENST00000556907 DAPK3O43293 454 aa16.82■□□□□ 0.28
PCNX4-213ENST00000556907 RHOCP08134 193 aa16.82■□□□□ 0.28
PCNX4-213ENST00000556907 CD70P32970 193 aa16.82■□□□□ 0.28
PCNX4-213ENST00000556907 VASPP50552 380 aaPredicted RBP16.82■□□□□ 0.28
PCNX4-213ENST00000556907 CCR3P51677 355 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms